Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Pde6bP23440 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Pde6bP23440 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pde6bP23440 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Pde6bP23440 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pde6bP23440 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pde6bP23440 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pde6bP23440 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.44■□□□□ 0.06
Pde6bP23440 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pde6bP23440 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pde6bP23440 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Pde6bP23440 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pde6bP23440 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Pde6bP23440 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pde6bP23440 Gm11478-201ENSMUST00000117851 599 ntBASIC15.44■□□□□ 0.06
Pde6bP23440 Gm15393-201ENSMUST00000120499 219 ntBASIC15.44■□□□□ 0.06
Pde6bP23440 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pde6bP23440 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pde6bP23440 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Pde6bP23440 Gm37917-201ENSMUST00000194711 392 ntBASIC15.44■□□□□ 0.06
Pde6bP23440 Gm43433-201ENSMUST00000196573 481 ntBASIC15.44■□□□□ 0.06
Pde6bP23440 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Pde6bP23440 Gm45384-201ENSMUST00000210451 277 ntBASIC15.44■□□□□ 0.06
Pde6bP23440 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.44■□□□□ 0.06
Pde6bP23440 Gm45668-201ENSMUST00000211271 493 ntBASIC15.44■□□□□ 0.06
Pde6bP23440 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC15.44■□□□□ 0.06
Pde6bP23440 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Pde6bP23440 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Pde6bP23440 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.44■□□□□ 0.06
Pde6bP23440 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pde6bP23440 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.44■□□□□ 0.06
Pde6bP23440 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pde6bP23440 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Pde6bP23440 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.43■□□□□ 0.06
Pde6bP23440 Gm15163-201ENSMUST00000120749 1302 ntBASIC15.43■□□□□ 0.06
Pde6bP23440 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.43■□□□□ 0.06
Pde6bP23440 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pde6bP23440 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pde6bP23440 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Pde6bP23440 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pde6bP23440 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pde6bP23440 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pde6bP23440 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pde6bP23440 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pde6bP23440 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pde6bP23440 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pde6bP23440 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pde6bP23440 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pde6bP23440 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pde6bP23440 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pde6bP23440 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pde6bP23440 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pde6bP23440 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pde6bP23440 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
Pde6bP23440 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pde6bP23440 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.43■□□□□ 0.06
Pde6bP23440 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pde6bP23440 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Pde6bP23440 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.43■□□□□ 0.06
Pde6bP23440 Gm10275-202ENSMUST00000168697 495 ntBASIC15.43■□□□□ 0.06
Pde6bP23440 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.43■□□□□ 0.06
Pde6bP23440 Gm10766-202ENSMUST00000194123 606 ntBASIC15.43■□□□□ 0.06
Pde6bP23440 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pde6bP23440 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.43■□□□□ 0.06
Pde6bP23440 Gm10275-201ENSMUST00000092620 635 ntBASIC15.43■□□□□ 0.06
Pde6bP23440 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pde6bP23440 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pde6bP23440 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pde6bP23440 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.43■□□□□ 0.06
Pde6bP23440 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pde6bP23440 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.43■□□□□ 0.06
Pde6bP23440 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pde6bP23440 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pde6bP23440 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pde6bP23440 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Pde6bP23440 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pde6bP23440 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pde6bP23440 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pde6bP23440 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pde6bP23440 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pde6bP23440 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pde6bP23440 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Pde6bP23440 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pde6bP23440 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pde6bP23440 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pde6bP23440 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.42■□□□□ 0.06
Pde6bP23440 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.42■□□□□ 0.06
Pde6bP23440 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.42■□□□□ 0.06
Pde6bP23440 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.42■□□□□ 0.06
Pde6bP23440 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.42■□□□□ 0.06
Pde6bP23440 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.42■□□□□ 0.06
Pde6bP23440 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.42■□□□□ 0.06
Pde6bP23440 Gm9908-201ENSMUST00000211534 448 ntBASIC15.42■□□□□ 0.06
Pde6bP23440 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.42■□□□□ 0.06
Pde6bP23440 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pde6bP23440 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pde6bP23440 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pde6bP23440 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pde6bP23440 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pde6bP23440 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms