Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Fv4P11370 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Fv4P11370 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Fv4P11370 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fv4P11370 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fv4P11370 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fv4P11370 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.67□□□□□ -0.22
Fv4P11370 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fv4P11370 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Fv4P11370 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.66□□□□□ -0.22
Fv4P11370 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fv4P11370 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fv4P11370 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Fv4P11370 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fv4P11370 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fv4P11370 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Fv4P11370 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fv4P11370 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fv4P11370 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fv4P11370 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fv4P11370 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.66□□□□□ -0.22
Fv4P11370 Gm11745-201ENSMUST00000121669 448 ntBASIC13.66□□□□□ -0.22
Fv4P11370 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.66□□□□□ -0.22
Fv4P11370 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fv4P11370 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fv4P11370 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fv4P11370 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fv4P11370 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fv4P11370 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Fv4P11370 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fv4P11370 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Fv4P11370 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fv4P11370 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fv4P11370 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fv4P11370 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fv4P11370 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fv4P11370 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fv4P11370 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fv4P11370 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.66□□□□□ -0.22
Fv4P11370 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fv4P11370 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fv4P11370 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.65□□□□□ -0.22
Fv4P11370 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fv4P11370 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fv4P11370 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fv4P11370 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fv4P11370 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Fv4P11370 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Fv4P11370 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fv4P11370 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fv4P11370 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fv4P11370 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fv4P11370 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fv4P11370 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Fv4P11370 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Fv4P11370 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.65□□□□□ -0.22
Fv4P11370 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.65□□□□□ -0.22
Fv4P11370 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Fv4P11370 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
Fv4P11370 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.65□□□□□ -0.22
Fv4P11370 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.65□□□□□ -0.22
Fv4P11370 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Fv4P11370 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.65□□□□□ -0.22
Fv4P11370 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.65□□□□□ -0.22
Fv4P11370 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.65□□□□□ -0.22
Fv4P11370 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fv4P11370 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Fv4P11370 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.65□□□□□ -0.22
Fv4P11370 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fv4P11370 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Fv4P11370 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.65□□□□□ -0.22
Fv4P11370 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fv4P11370 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fv4P11370 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Fv4P11370 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fv4P11370 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.65□□□□□ -0.22
Fv4P11370 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Fv4P11370 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Fv4P11370 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fv4P11370 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Fv4P11370 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
Fv4P11370 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fv4P11370 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fv4P11370 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fv4P11370 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fv4P11370 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Fv4P11370 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fv4P11370 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fv4P11370 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fv4P11370 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fv4P11370 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fv4P11370 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.64□□□□□ -0.23
Fv4P11370 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.64□□□□□ -0.23
Fv4P11370 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.64□□□□□ -0.23
Fv4P11370 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.64□□□□□ -0.23
Fv4P11370 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.64□□□□□ -0.23
Fv4P11370 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.64□□□□□ -0.23
Fv4P11370 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fv4P11370 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Fv4P11370 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms