Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Psmb5-202ENSMUST00000227257 622 ntBASIC11.46□□□□□ -0.57
P06323 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P06323 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.46□□□□□ -0.57
P06323 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.46□□□□□ -0.58
P06323 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
P06323 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
P06323 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
P06323 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
P06323 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.46□□□□□ -0.58
P06323 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
P06323 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
P06323 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
P06323 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
P06323 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
P06323 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
P06323 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
P06323 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P06323 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P06323 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
P06323 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P06323 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
P06323 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P06323 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
P06323 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
P06323 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P06323 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P06323 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.45□□□□□ -0.58
P06323 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P06323 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
P06323 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
P06323 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P06323 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P06323 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P06323 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P06323 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC11.45□□□□□ -0.58
P06323 Gm9385-201ENSMUST00000117563 472 ntBASIC11.45□□□□□ -0.58
P06323 Gm5479-201ENSMUST00000160578 435 ntBASIC11.45□□□□□ -0.58
P06323 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P06323 Gm7229-201ENSMUST00000214719 1007 ntBASIC11.45□□□□□ -0.58
P06323 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.45□□□□□ -0.58
P06323 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P06323 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
P06323 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
P06323 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
P06323 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P06323 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
P06323 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
P06323 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P06323 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P06323 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
P06323 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
P06323 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.45□□□□□ -0.58
P06323 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.44□□□□□ -0.58
P06323 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.44□□□□□ -0.58
P06323 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.44□□□□□ -0.58
P06323 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
P06323 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.44□□□□□ -0.58
P06323 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.44□□□□□ -0.58
P06323 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
P06323 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
P06323 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Gm37230-201ENSMUST00000194491 818 ntBASIC11.44□□□□□ -0.58
P06323 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
P06323 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
P06323 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.44□□□□□ -0.58
P06323 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.44□□□□□ -0.58
P06323 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P06323 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
P06323 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
P06323 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.43□□□□□ -0.58
P06323 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms