Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
P06320 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
P06320 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
P06320 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
P06320 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
P06320 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
P06320 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
P06320 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
P06320 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Gm11405-201ENSMUST00000118689 1556 ntBASIC8.92□□□□□ -0.98
P06320 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC8.92□□□□□ -0.98
P06320 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
P06320 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC8.92□□□□□ -0.98
P06320 CT010506.4-201ENSMUST00000225457 351 ntBASIC8.92□□□□□ -0.98
P06320 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC8.92□□□□□ -0.98
P06320 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC8.92□□□□□ -0.98
P06320 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC8.92□□□□□ -0.98
P06320 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
P06320 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC8.91□□□□□ -0.98
P06320 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Gm37861-201ENSMUST00000193534 2869 ntBASIC8.91□□□□□ -0.98
P06320 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
P06320 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC8.91□□□□□ -0.98
P06320 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC8.91□□□□□ -0.98
P06320 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
P06320 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC8.91□□□□□ -0.98
P06320 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC8.91□□□□□ -0.98
P06320 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
P06320 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC8.91□□□□□ -0.98
P06320 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
P06320 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms