Protein–RNA interactions for Protein: P04212

T-cell receptor beta chain V region LB2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04212 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04212 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04212 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.5□□□□□ -0.57
P04212 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04212 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04212 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04212 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04212 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04212 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04212 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.49□□□□□ -0.57
P04212 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
P04212 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04212 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04212 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04212 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04212 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04212 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04212 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
P04212 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04212 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04212 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04212 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.49□□□□□ -0.57
P04212 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04212 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
P04212 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04212 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.49□□□□□ -0.57
P04212 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04212 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04212 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC11.49□□□□□ -0.57
P04212 Rpph1-201ENSMUST00000175096 319 ntBASIC11.49□□□□□ -0.57
P04212 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.49□□□□□ -0.57
P04212 Gm27920-201ENSMUST00000183953 96 ntBASIC11.49□□□□□ -0.57
P04212 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.49□□□□□ -0.57
P04212 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.49□□□□□ -0.57
P04212 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04212 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
P04212 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04212 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04212 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04212 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.49□□□□□ -0.57
P04212 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
P04212 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
P04212 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
P04212 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04212 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04212 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04212 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04212 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
P04212 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04212 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04212 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
P04212 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
P04212 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Gm15427-201ENSMUST00000117288 531 ntBASIC11.48□□□□□ -0.57
P04212 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.48□□□□□ -0.57
P04212 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
P04212 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.48□□□□□ -0.57
P04212 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.48□□□□□ -0.57
P04212 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Mir8117-201ENSMUST00000184773 107 ntBASIC11.48□□□□□ -0.57
P04212 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.48□□□□□ -0.57
P04212 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
P04212 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
P04212 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
P04212 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.48□□□□□ -0.57
P04212 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
P04212 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04212 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P04212 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms