Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a1P02463 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC17.07■□□□□ 0.32
Col4a1P02463 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC17.07■□□□□ 0.32
Col4a1P02463 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC17.07■□□□□ 0.32
Col4a1P02463 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC17.07■□□□□ 0.32
Col4a1P02463 Gm5850-201ENSMUST00000192923 1206 ntBASIC17.07■□□□□ 0.32
Col4a1P02463 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC17.07■□□□□ 0.32
Col4a1P02463 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC17.07■□□□□ 0.32
Col4a1P02463 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC17.07■□□□□ 0.32
Col4a1P02463 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a1P02463 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a1P02463 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Col4a1P02463 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Col4a1P02463 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Col4a1P02463 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC17.06■□□□□ 0.32
Col4a1P02463 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Col4a1P02463 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Col4a1P02463 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC17.06■□□□□ 0.32
Col4a1P02463 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC17.06■□□□□ 0.32
Col4a1P02463 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC17.06■□□□□ 0.32
Col4a1P02463 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Col4a1P02463 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a1P02463 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a1P02463 Gm18222-201ENSMUST00000202416 1387 ntBASIC17.05■□□□□ 0.32
Col4a1P02463 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a1P02463 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Col4a1P02463 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC17.05■□□□□ 0.32
Col4a1P02463 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC17.05■□□□□ 0.32
Col4a1P02463 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC17.05■□□□□ 0.32
Col4a1P02463 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC17.05■□□□□ 0.32
Col4a1P02463 Gm27516-201ENSMUST00000184237 98 ntBASIC17.05■□□□□ 0.32
Col4a1P02463 Gm43133-201ENSMUST00000197472 463 ntBASIC17.05■□□□□ 0.32
Col4a1P02463 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
Col4a1P02463 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a1P02463 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Col4a1P02463 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a1P02463 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC17.05■□□□□ 0.32
Col4a1P02463 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a1P02463 Gm18630-201ENSMUST00000222109 1397 ntBASIC17.05■□□□□ 0.32
Col4a1P02463 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a1P02463 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Col4a1P02463 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a1P02463 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Col4a1P02463 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a1P02463 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a1P02463 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a1P02463 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Col4a1P02463 Gm10327-201ENSMUST00000105222 1002 ntBASIC17.04■□□□□ 0.32
Col4a1P02463 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC17.04■□□□□ 0.32
Col4a1P02463 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Col4a1P02463 Gm13369-201ENSMUST00000119442 987 ntBASIC17.04■□□□□ 0.32
Col4a1P02463 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Col4a1P02463 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC17.04■□□□□ 0.32
Col4a1P02463 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC17.04■□□□□ 0.32
Col4a1P02463 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a1P02463 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC17.04■□□□□ 0.32
Col4a1P02463 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC17.04■□□□□ 0.32
Col4a1P02463 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC17.04■□□□□ 0.32
Col4a1P02463 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC17.04■□□□□ 0.32
Col4a1P02463 Gm19309-201ENSMUST00000218295 205 ntBASIC17.04■□□□□ 0.32
Col4a1P02463 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a1P02463 Rn7sk-201ENSMUST00000083103 331 ntBASIC17.04■□□□□ 0.32
Col4a1P02463 Gm26315-201ENSMUST00000083890 321 ntBASIC17.04■□□□□ 0.32
Col4a1P02463 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Col4a1P02463 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a1P02463 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a1P02463 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a1P02463 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Col4a1P02463 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a1P02463 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms