Protein–RNA interactions for Protein: P01811

Ig heavy chain V region UPC10, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01811 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01811 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC10.48□□□□□ -0.73
P01811 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC10.47□□□□□ -0.73
P01811 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01811 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01811 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P01811 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01811 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01811 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01811 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01811 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01811 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01811 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
P01811 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01811 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
P01811 Gm6973-201ENSMUST00000117080 721 ntBASIC10.47□□□□□ -0.73
P01811 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC10.47□□□□□ -0.73
P01811 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P01811 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC10.47□□□□□ -0.73
P01811 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
P01811 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC10.47□□□□□ -0.73
P01811 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01811 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01811 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC10.47□□□□□ -0.73
P01811 Gm10313-201ENSMUST00000095320 1002 ntBASIC10.47□□□□□ -0.73
P01811 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01811 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01811 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01811 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC10.47□□□□□ -0.73
P01811 CT030684.3-201ENSMUST00000227308 2445 ntBASIC10.47□□□□□ -0.73
P01811 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
P01811 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01811 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01811 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01811 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P01811 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01811 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC10.47□□□□□ -0.73
P01811 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P01811 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01811 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC10.47□□□□□ -0.73
P01811 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P01811 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01811 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P01811 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
P01811 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC10.46□□□□□ -0.73
P01811 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P01811 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
P01811 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
P01811 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
P01811 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
P01811 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P01811 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC10.46□□□□□ -0.73
P01811 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P01811 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P01811 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
P01811 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P01811 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P01811 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC10.46□□□□□ -0.73
P01811 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
P01811 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC10.46□□□□□ -0.73
P01811 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC10.46□□□□□ -0.73
P01811 Gm6944-201ENSMUST00000182449 1006 ntBASIC10.46□□□□□ -0.73
P01811 Mir6990-201ENSMUST00000183724 91 ntBASIC10.46□□□□□ -0.73
P01811 Gm43125-201ENSMUST00000201724 730 ntBASIC10.46□□□□□ -0.73
P01811 Gm30437-201ENSMUST00000206086 1201 ntBASIC10.46□□□□□ -0.73
P01811 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC10.46□□□□□ -0.73
P01811 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
P01811 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC10.46□□□□□ -0.73
P01811 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P01811 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P01811 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P01811 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
P01811 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC10.46□□□□□ -0.74
P01811 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
P01811 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
P01811 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
P01811 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
P01811 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
P01811 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
P01811 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
P01811 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
P01811 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
P01811 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
P01811 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.46□□□□□ -0.74
P01811 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC10.46□□□□□ -0.74
P01811 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
P01811 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
P01811 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
P01811 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
P01811 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
P01811 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
P01811 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
P01811 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
P01811 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
P01811 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
P01811 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
P01811 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC10.45□□□□□ -0.74
P01811 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
P01811 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
P01811 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms