Protein–RNA interactions for Protein: P01728

Ig lambda-2 chain V region, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01728 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01728 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.07□□□□□ -0.64
P01728 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01728 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
P01728 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01728 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC11.07□□□□□ -0.64
P01728 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC11.07□□□□□ -0.64
P01728 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.07□□□□□ -0.64
P01728 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
P01728 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P01728 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.07□□□□□ -0.64
P01728 Gm6550-201ENSMUST00000187574 993 ntBASIC11.07□□□□□ -0.64
P01728 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC11.07□□□□□ -0.64
P01728 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.07□□□□□ -0.64
P01728 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.07□□□□□ -0.64
P01728 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P01728 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
P01728 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC11.07□□□□□ -0.64
P01728 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.07□□□□□ -0.64
P01728 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
P01728 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
P01728 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.07□□□□□ -0.64
P01728 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.07□□□□□ -0.64
P01728 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.07□□□□□ -0.64
P01728 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01728 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
P01728 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01728 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01728 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01728 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
P01728 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01728 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P01728 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01728 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01728 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.07□□□□□ -0.64
P01728 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01728 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
P01728 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01728 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01728 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01728 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01728 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01728 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01728 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01728 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
P01728 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01728 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01728 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01728 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.06□□□□□ -0.64
P01728 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
P01728 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01728 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01728 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.06□□□□□ -0.64
P01728 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC11.06□□□□□ -0.64
P01728 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01728 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC11.06□□□□□ -0.64
P01728 Gm16198-201ENSMUST00000118766 670 ntBASIC11.06□□□□□ -0.64
P01728 Gm13597-201ENSMUST00000121239 375 ntBASIC11.06□□□□□ -0.64
P01728 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
P01728 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
P01728 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
P01728 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P01728 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
P01728 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01728 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC11.06□□□□□ -0.64
P01728 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.06□□□□□ -0.64
P01728 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01728 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01728 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01728 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01728 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01728 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P01728 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01728 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01728 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.06□□□□□ -0.64
P01728 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.06□□□□□ -0.64
P01728 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
P01728 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
P01728 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
P01728 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.06□□□□□ -0.64
P01728 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
P01728 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01728 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01728 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01728 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01728 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01728 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01728 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01728 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
P01728 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.05□□□□□ -0.64
P01728 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P01728 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P01728 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01728 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01728 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01728 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01728 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01728 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
P01728 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
P01728 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms