Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cops6O88545 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cops6O88545 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cops6O88545 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cops6O88545 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Cops6O88545 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.18■□□□□ 0.34
Cops6O88545 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cops6O88545 Gm44981-201ENSMUST00000205549 1943 ntBASIC17.18■□□□□ 0.34
Cops6O88545 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cops6O88545 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cops6O88545 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cops6O88545 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC17.18■□□□□ 0.34
Cops6O88545 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC17.18■□□□□ 0.34
Cops6O88545 Mir1894-201ENSMUST00000122802 81 ntBASIC17.18■□□□□ 0.34
Cops6O88545 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC17.18■□□□□ 0.34
Cops6O88545 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC17.18■□□□□ 0.34
Cops6O88545 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cops6O88545 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC17.18■□□□□ 0.34
Cops6O88545 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC17.18■□□□□ 0.34
Cops6O88545 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC17.18■□□□□ 0.34
Cops6O88545 Gm7067-201ENSMUST00000207698 1249 ntBASIC17.18■□□□□ 0.34
Cops6O88545 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cops6O88545 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cops6O88545 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.18■□□□□ 0.34
Cops6O88545 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC17.18■□□□□ 0.34
Cops6O88545 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC17.18■□□□□ 0.34
Cops6O88545 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.18■□□□□ 0.34
Cops6O88545 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cops6O88545 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cops6O88545 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.17■□□□□ 0.34
Cops6O88545 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.17■□□□□ 0.34
Cops6O88545 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cops6O88545 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cops6O88545 Gm37015-201ENSMUST00000192763 1521 ntBASIC17.17■□□□□ 0.34
Cops6O88545 AC126549.2-201ENSMUST00000223997 1976 ntBASIC17.17■□□□□ 0.34
Cops6O88545 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cops6O88545 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cops6O88545 Gm15429-201ENSMUST00000151268 798 ntBASIC17.17■□□□□ 0.34
Cops6O88545 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cops6O88545 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC17.17■□□□□ 0.34
Cops6O88545 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Cops6O88545 Gm8463-201ENSMUST00000208573 613 ntBASIC17.17■□□□□ 0.34
Cops6O88545 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cops6O88545 AC125350.2-201ENSMUST00000224737 727 ntBASIC17.17■□□□□ 0.34
Cops6O88545 CT030704.2-201ENSMUST00000228887 494 ntBASIC17.17■□□□□ 0.34
Cops6O88545 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cops6O88545 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cops6O88545 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cops6O88545 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cops6O88545 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cops6O88545 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Cops6O88545 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cops6O88545 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cops6O88545 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cops6O88545 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Cops6O88545 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cops6O88545 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
Cops6O88545 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cops6O88545 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cops6O88545 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cops6O88545 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cops6O88545 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cops6O88545 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cops6O88545 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC17.16■□□□□ 0.34
Cops6O88545 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cops6O88545 Gm5303-201ENSMUST00000117943 1252 ntBASIC17.16■□□□□ 0.34
Cops6O88545 Gm27772-201ENSMUST00000184900 187 ntBASIC17.16■□□□□ 0.34
Cops6O88545 Gm4971-201ENSMUST00000205991 1108 ntBASIC17.16■□□□□ 0.34
Cops6O88545 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cops6O88545 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cops6O88545 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cops6O88545 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cops6O88545 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cops6O88545 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cops6O88545 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cops6O88545 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cops6O88545 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cops6O88545 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cops6O88545 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cops6O88545 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cops6O88545 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cops6O88545 Gm21038-201ENSMUST00000222205 1383 ntBASIC17.15■□□□□ 0.34
Cops6O88545 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cops6O88545 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cops6O88545 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.15■□□□□ 0.34
Cops6O88545 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Cops6O88545 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.15■□□□□ 0.34
Cops6O88545 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cops6O88545 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cops6O88545 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cops6O88545 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cops6O88545 AL645783.1-201ENSMUST00000221416 1832 ntBASIC17.15■□□□□ 0.34
Cops6O88545 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cops6O88545 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cops6O88545 Gm13689-201ENSMUST00000119360 685 ntBASIC17.15■□□□□ 0.34
Cops6O88545 Gm11425-201ENSMUST00000119608 498 ntBASIC17.15■□□□□ 0.34
Cops6O88545 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cops6O88545 Gm44799-201ENSMUST00000207639 1202 ntBASIC17.15■□□□□ 0.34
Cops6O88545 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cops6O88545 Gm17794-201ENSMUST00000220252 955 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms