Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf17O88472 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf17O88472 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf17O88472 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Tnfrsf17O88472 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.08□□□□□ -0.32
Tnfrsf17O88472 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf17O88472 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf17O88472 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.08□□□□□ -0.32
Tnfrsf17O88472 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.08□□□□□ -0.32
Tnfrsf17O88472 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Tnfrsf17O88472 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.08□□□□□ -0.32
Tnfrsf17O88472 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf17O88472 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf17O88472 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf17O88472 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Gm11793-201ENSMUST00000120433 981 ntBASIC13.07□□□□□ -0.32
Tnfrsf17O88472 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Tnfrsf17O88472 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Gm5363-201ENSMUST00000211927 938 ntBASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Gm8598-201ENSMUST00000221184 836 ntBASIC13.07□□□□□ -0.32
Tnfrsf17O88472 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf17O88472 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf17O88472 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Gm22323-201ENSMUST00000103832 109 ntBASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Gm12241-201ENSMUST00000118330 726 ntBASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Gm15957-201ENSMUST00000118893 974 ntBASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Gm15782-201ENSMUST00000121073 445 ntBASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Gm2383-201ENSMUST00000181461 807 ntBASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Gm27682-201ENSMUST00000183930 110 ntBASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Gm27320-201ENSMUST00000184892 109 ntBASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Gm43133-201ENSMUST00000197472 463 ntBASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Olfr284-202ENSMUST00000206647 966 ntBASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf17O88472 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms