Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nid2O88322 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Nid2O88322 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC18.14■□□□□ 0.49
Nid2O88322 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nid2O88322 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC18.14■□□□□ 0.49
Nid2O88322 Gm29199-201ENSMUST00000187766 775 ntBASIC18.14■□□□□ 0.49
Nid2O88322 Gm37922-201ENSMUST00000195596 455 ntBASIC18.14■□□□□ 0.49
Nid2O88322 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Nid2O88322 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC18.14■□□□□ 0.49
Nid2O88322 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nid2O88322 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nid2O88322 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nid2O88322 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nid2O88322 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nid2O88322 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Nid2O88322 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC18.13■□□□□ 0.49
Nid2O88322 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nid2O88322 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nid2O88322 Gm6203-201ENSMUST00000209575 1342 ntBASIC18.13■□□□□ 0.49
Nid2O88322 AC126549.2-201ENSMUST00000223997 1976 ntBASIC18.13■□□□□ 0.49
Nid2O88322 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Nid2O88322 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nid2O88322 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nid2O88322 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nid2O88322 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Nid2O88322 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC18.13■□□□□ 0.49
Nid2O88322 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
Nid2O88322 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nid2O88322 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nid2O88322 Gm29396-201ENSMUST00000185659 716 ntBASIC18.13■□□□□ 0.49
Nid2O88322 Gm37497-201ENSMUST00000195830 798 ntBASIC18.13■□□□□ 0.49
Nid2O88322 Tyms-ps-201ENSMUST00000219550 915 ntBASIC18.13■□□□□ 0.49
Nid2O88322 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nid2O88322 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nid2O88322 Gm10268-201ENSMUST00000085340 555 ntBASIC18.13■□□□□ 0.49
Nid2O88322 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nid2O88322 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nid2O88322 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nid2O88322 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC18.12■□□□□ 0.49
Nid2O88322 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC18.12■□□□□ 0.49
Nid2O88322 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nid2O88322 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nid2O88322 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Nid2O88322 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nid2O88322 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC18.12■□□□□ 0.49
Nid2O88322 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nid2O88322 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nid2O88322 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nid2O88322 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nid2O88322 Gm13369-201ENSMUST00000119442 987 ntBASIC18.12■□□□□ 0.49
Nid2O88322 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC18.12■□□□□ 0.49
Nid2O88322 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nid2O88322 Gm25927-201ENSMUST00000175058 117 ntBASIC18.12■□□□□ 0.49
Nid2O88322 Gm6334-201ENSMUST00000207083 228 ntBASIC18.12■□□□□ 0.49
Nid2O88322 Gm18935-201ENSMUST00000212692 664 ntBASIC18.12■□□□□ 0.49
Nid2O88322 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC18.12■□□□□ 0.49
Nid2O88322 Gm2824-203ENSMUST00000226189 1228 ntBASIC18.12■□□□□ 0.49
Nid2O88322 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Nid2O88322 Rn7sk-201ENSMUST00000083103 331 ntBASIC18.12■□□□□ 0.49
Nid2O88322 Gm26315-201ENSMUST00000083890 321 ntBASIC18.12■□□□□ 0.49
Nid2O88322 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nid2O88322 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nid2O88322 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nid2O88322 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nid2O88322 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nid2O88322 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nid2O88322 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nid2O88322 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nid2O88322 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.11■□□□□ 0.49
Nid2O88322 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nid2O88322 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nid2O88322 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nid2O88322 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nid2O88322 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Nid2O88322 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nid2O88322 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nid2O88322 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Nid2O88322 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nid2O88322 Gm15770-201ENSMUST00000117498 584 ntBASIC18.11■□□□□ 0.49
Nid2O88322 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC18.11■□□□□ 0.49
Nid2O88322 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nid2O88322 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nid2O88322 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC18.11■□□□□ 0.49
Nid2O88322 Gm4935-201ENSMUST00000221316 1198 ntBASIC18.11■□□□□ 0.49
Nid2O88322 AC154462.2-201ENSMUST00000227519 370 ntBASIC18.11■□□□□ 0.49
Nid2O88322 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nid2O88322 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nid2O88322 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nid2O88322 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC18.11■□□□□ 0.49
Nid2O88322 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC18.11■□□□□ 0.49
Nid2O88322 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Nid2O88322 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nid2O88322 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nid2O88322 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nid2O88322 Gm15544-201ENSMUST00000118776 1531 ntBASIC18.1■□□□□ 0.49
Nid2O88322 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nid2O88322 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nid2O88322 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nid2O88322 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nid2O88322 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms