Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarce1O54941 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarce1O54941 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
Smarce1O54941 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarce1O54941 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.8■□□□□ 0.28
Smarce1O54941 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarce1O54941 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarce1O54941 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarce1O54941 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarce1O54941 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smarce1O54941 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC16.79■□□□□ 0.28
Smarce1O54941 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarce1O54941 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Smarce1O54941 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarce1O54941 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarce1O54941 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarce1O54941 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarce1O54941 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarce1O54941 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarce1O54941 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.79■□□□□ 0.28
Smarce1O54941 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smarce1O54941 Gm44608-201ENSMUST00000206827 855 ntBASIC16.79■□□□□ 0.28
Smarce1O54941 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.79■□□□□ 0.28
Smarce1O54941 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smarce1O54941 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarce1O54941 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarce1O54941 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarce1O54941 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarce1O54941 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smarce1O54941 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarce1O54941 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarce1O54941 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarce1O54941 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Smarce1O54941 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Smarce1O54941 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarce1O54941 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarce1O54941 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarce1O54941 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.78■□□□□ 0.28
Smarce1O54941 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.78■□□□□ 0.28
Smarce1O54941 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarce1O54941 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarce1O54941 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarce1O54941 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Smarce1O54941 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarce1O54941 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Smarce1O54941 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarce1O54941 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Smarce1O54941 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarce1O54941 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.78■□□□□ 0.28
Smarce1O54941 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smarce1O54941 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarce1O54941 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.78■□□□□ 0.28
Smarce1O54941 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarce1O54941 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Smarce1O54941 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.78■□□□□ 0.28
Smarce1O54941 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smarce1O54941 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarce1O54941 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarce1O54941 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smarce1O54941 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smarce1O54941 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarce1O54941 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smarce1O54941 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smarce1O54941 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smarce1O54941 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarce1O54941 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
Smarce1O54941 Gm18244-201ENSMUST00000219747 1566 ntBASIC16.77■□□□□ 0.28
Smarce1O54941 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Smarce1O54941 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarce1O54941 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.77■□□□□ 0.28
Smarce1O54941 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smarce1O54941 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smarce1O54941 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smarce1O54941 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarce1O54941 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC16.77■□□□□ 0.28
Smarce1O54941 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.77■□□□□ 0.28
Smarce1O54941 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.77■□□□□ 0.28
Smarce1O54941 Gm1401-201ENSMUST00000122048 772 ntBASIC16.77■□□□□ 0.28
Smarce1O54941 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.77■□□□□ 0.28
Smarce1O54941 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.77■□□□□ 0.28
Smarce1O54941 Gm17271-201ENSMUST00000165535 355 ntBASIC16.77■□□□□ 0.28
Smarce1O54941 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.77■□□□□ 0.28
Smarce1O54941 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.77■□□□□ 0.28
Smarce1O54941 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.77■□□□□ 0.28
Smarce1O54941 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smarce1O54941 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarce1O54941 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarce1O54941 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarce1O54941 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarce1O54941 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarce1O54941 CT030684.3-201ENSMUST00000227308 2445 ntBASIC16.77■□□□□ 0.27
Smarce1O54941 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarce1O54941 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarce1O54941 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarce1O54941 Pcgf5-211ENSMUST00000225920 6443 ntBASIC16.77■□□□□ 0.27
Smarce1O54941 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarce1O54941 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarce1O54941 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarce1O54941 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.77■□□□□ 0.27
Smarce1O54941 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms