Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nr1i3O35627 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nr1i3O35627 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nr1i3O35627 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Nr1i3O35627 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.19■□□□□ 0.02
Nr1i3O35627 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nr1i3O35627 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nr1i3O35627 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nr1i3O35627 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nr1i3O35627 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nr1i3O35627 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nr1i3O35627 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nr1i3O35627 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nr1i3O35627 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nr1i3O35627 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nr1i3O35627 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nr1i3O35627 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nr1i3O35627 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nr1i3O35627 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nr1i3O35627 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nr1i3O35627 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.18■□□□□ 0.02
Nr1i3O35627 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.18■□□□□ 0.02
Nr1i3O35627 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nr1i3O35627 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.18■□□□□ 0.02
Nr1i3O35627 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nr1i3O35627 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.18■□□□□ 0.02
Nr1i3O35627 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.18■□□□□ 0.02
Nr1i3O35627 AA543401-201ENSMUST00000164248 1269 ntBASIC15.18■□□□□ 0.02
Nr1i3O35627 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.18■□□□□ 0.02
Nr1i3O35627 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.18■□□□□ 0.02
Nr1i3O35627 Gm27494-201ENSMUST00000184735 189 ntBASIC15.18■□□□□ 0.02
Nr1i3O35627 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nr1i3O35627 Gm18049-201ENSMUST00000208909 581 ntBASIC15.18■□□□□ 0.02
Nr1i3O35627 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nr1i3O35627 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.18■□□□□ 0.02
Nr1i3O35627 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nr1i3O35627 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nr1i3O35627 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nr1i3O35627 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nr1i3O35627 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nr1i3O35627 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nr1i3O35627 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nr1i3O35627 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nr1i3O35627 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nr1i3O35627 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.18■□□□□ 0.02
Nr1i3O35627 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nr1i3O35627 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nr1i3O35627 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nr1i3O35627 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nr1i3O35627 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nr1i3O35627 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nr1i3O35627 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nr1i3O35627 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nr1i3O35627 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nr1i3O35627 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.17■□□□□ 0.02
Nr1i3O35627 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nr1i3O35627 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.17■□□□□ 0.02
Nr1i3O35627 Mir1895-201ENSMUST00000122615 79 ntBASIC15.17■□□□□ 0.02
Nr1i3O35627 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.17■□□□□ 0.02
Nr1i3O35627 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.17■□□□□ 0.02
Nr1i3O35627 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.17■□□□□ 0.02
Nr1i3O35627 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nr1i3O35627 Gm45453-201ENSMUST00000211758 853 ntBASIC15.17■□□□□ 0.02
Nr1i3O35627 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.17■□□□□ 0.02
Nr1i3O35627 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nr1i3O35627 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nr1i3O35627 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nr1i3O35627 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Nr1i3O35627 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Nr1i3O35627 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Nr1i3O35627 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Nr1i3O35627 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.17■□□□□ 0.02
Nr1i3O35627 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nr1i3O35627 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nr1i3O35627 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nr1i3O35627 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nr1i3O35627 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nr1i3O35627 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Nr1i3O35627 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nr1i3O35627 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.17■□□□□ 0.02
Nr1i3O35627 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nr1i3O35627 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1i3O35627 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.16■□□□□ 0.02
Nr1i3O35627 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1i3O35627 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Nr1i3O35627 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Nr1i3O35627 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.16■□□□□ 0.02
Nr1i3O35627 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1i3O35627 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1i3O35627 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1i3O35627 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1i3O35627 Gm25287-201ENSMUST00000103846 110 ntBASIC15.16■□□□□ 0.02
Nr1i3O35627 Gm22918-201ENSMUST00000103855 110 ntBASIC15.16■□□□□ 0.02
Nr1i3O35627 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1i3O35627 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.16■□□□□ 0.02
Nr1i3O35627 Gm13015-201ENSMUST00000118674 204 ntBASIC15.16■□□□□ 0.02
Nr1i3O35627 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.16■□□□□ 0.02
Nr1i3O35627 Gm18889-201ENSMUST00000174284 929 ntBASIC15.16■□□□□ 0.02
Nr1i3O35627 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.16■□□□□ 0.02
Nr1i3O35627 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 158.2 ms