Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf6bO35451 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.32□□□□□ -0.44
Atf6bO35451 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf6bO35451 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.32□□□□□ -0.44
Atf6bO35451 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Atf6bO35451 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf6bO35451 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.32□□□□□ -0.44
Atf6bO35451 Gm13616-201ENSMUST00000120600 222 ntBASIC12.32□□□□□ -0.44
Atf6bO35451 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf6bO35451 Gm25948-201ENSMUST00000175334 112 ntBASIC12.32□□□□□ -0.44
Atf6bO35451 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.32□□□□□ -0.44
Atf6bO35451 Gm37230-201ENSMUST00000194491 818 ntBASIC12.32□□□□□ -0.44
Atf6bO35451 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Atf6bO35451 Gm18049-201ENSMUST00000208909 581 ntBASIC12.32□□□□□ -0.44
Atf6bO35451 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf6bO35451 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.32□□□□□ -0.44
Atf6bO35451 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.32□□□□□ -0.44
Atf6bO35451 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf6bO35451 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf6bO35451 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf6bO35451 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf6bO35451 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf6bO35451 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.32□□□□□ -0.44
Atf6bO35451 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf6bO35451 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf6bO35451 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf6bO35451 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.32□□□□□ -0.44
Atf6bO35451 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf6bO35451 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf6bO35451 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atf6bO35451 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Atf6bO35451 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.31□□□□□ -0.44
Atf6bO35451 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Atf6bO35451 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atf6bO35451 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atf6bO35451 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atf6bO35451 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atf6bO35451 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atf6bO35451 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atf6bO35451 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atf6bO35451 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atf6bO35451 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atf6bO35451 Gm13015-201ENSMUST00000118674 204 ntBASIC12.31□□□□□ -0.44
Atf6bO35451 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Atf6bO35451 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.31□□□□□ -0.44
Atf6bO35451 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.31□□□□□ -0.44
Atf6bO35451 Gm5779-201ENSMUST00000218467 910 ntBASIC12.31□□□□□ -0.44
Atf6bO35451 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.31□□□□□ -0.44
Atf6bO35451 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Atf6bO35451 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Atf6bO35451 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atf6bO35451 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atf6bO35451 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atf6bO35451 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.31□□□□□ -0.44
Atf6bO35451 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atf6bO35451 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atf6bO35451 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atf6bO35451 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Atf6bO35451 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atf6bO35451 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Atf6bO35451 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atf6bO35451 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atf6bO35451 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atf6bO35451 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atf6bO35451 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atf6bO35451 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atf6bO35451 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Atf6bO35451 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Atf6bO35451 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Atf6bO35451 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Atf6bO35451 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atf6bO35451 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Atf6bO35451 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atf6bO35451 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Atf6bO35451 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.3□□□□□ -0.44
Atf6bO35451 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atf6bO35451 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Atf6bO35451 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.3□□□□□ -0.44
Atf6bO35451 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.3□□□□□ -0.44
Atf6bO35451 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atf6bO35451 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Atf6bO35451 Carlr-201ENSMUST00000181515 2574 ntBASIC12.3□□□□□ -0.44
Atf6bO35451 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atf6bO35451 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atf6bO35451 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atf6bO35451 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atf6bO35451 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atf6bO35451 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atf6bO35451 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atf6bO35451 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atf6bO35451 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atf6bO35451 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Atf6bO35451 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atf6bO35451 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atf6bO35451 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atf6bO35451 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atf6bO35451 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atf6bO35451 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Atf6bO35451 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atf6bO35451 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms