Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.53□□□□□ -0.08
Trove2O08848 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trove2O08848 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trove2O08848 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trove2O08848 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.53□□□□□ -0.08
Trove2O08848 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trove2O08848 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trove2O08848 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.53□□□□□ -0.08
Trove2O08848 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.53□□□□□ -0.08
Trove2O08848 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trove2O08848 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.53□□□□□ -0.08
Trove2O08848 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trove2O08848 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.53□□□□□ -0.08
Trove2O08848 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
Trove2O08848 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trove2O08848 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trove2O08848 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trove2O08848 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trove2O08848 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trove2O08848 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trove2O08848 Gm43061-201ENSMUST00000198850 2241 ntBASIC14.53□□□□□ -0.08
Trove2O08848 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trove2O08848 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trove2O08848 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trove2O08848 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.52□□□□□ -0.08
Trove2O08848 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Trove2O08848 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trove2O08848 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trove2O08848 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trove2O08848 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trove2O08848 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Trove2O08848 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trove2O08848 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.52□□□□□ -0.09
Trove2O08848 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trove2O08848 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trove2O08848 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.52□□□□□ -0.09
Trove2O08848 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trove2O08848 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trove2O08848 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trove2O08848 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trove2O08848 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trove2O08848 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trove2O08848 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trove2O08848 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Trove2O08848 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trove2O08848 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trove2O08848 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trove2O08848 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trove2O08848 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trove2O08848 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trove2O08848 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trove2O08848 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trove2O08848 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trove2O08848 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trove2O08848 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trove2O08848 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trove2O08848 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trove2O08848 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trove2O08848 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.51□□□□□ -0.09
Trove2O08848 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trove2O08848 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trove2O08848 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trove2O08848 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trove2O08848 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trove2O08848 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trove2O08848 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trove2O08848 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trove2O08848 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trove2O08848 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trove2O08848 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trove2O08848 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trove2O08848 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trove2O08848 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.51□□□□□ -0.09
Trove2O08848 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.51□□□□□ -0.09
Trove2O08848 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trove2O08848 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.51□□□□□ -0.09
Trove2O08848 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.51□□□□□ -0.09
Trove2O08848 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trove2O08848 Gm27300-201ENSMUST00000184085 97 ntBASIC14.51□□□□□ -0.09
Trove2O08848 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.51□□□□□ -0.09
Trove2O08848 Gm27335-201ENSMUST00000184758 97 ntBASIC14.51□□□□□ -0.09
Trove2O08848 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.51□□□□□ -0.09
Trove2O08848 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.51□□□□□ -0.09
Trove2O08848 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trove2O08848 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trove2O08848 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trove2O08848 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trove2O08848 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trove2O08848 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trove2O08848 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trove2O08848 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trove2O08848 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trove2O08848 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.5□□□□□ -0.09
Trove2O08848 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trove2O08848 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trove2O08848 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
Trove2O08848 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trove2O08848 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trove2O08848 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trove2O08848 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms