Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3aO08759 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3aO08759 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.29■□□□□ 0.04
Ube3aO08759 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
Ube3aO08759 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3aO08759 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ube3aO08759 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3aO08759 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.29■□□□□ 0.04
Ube3aO08759 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3aO08759 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3aO08759 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3aO08759 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3aO08759 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3aO08759 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3aO08759 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3aO08759 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.28■□□□□ 0.04
Ube3aO08759 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3aO08759 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3aO08759 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3aO08759 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3aO08759 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Ube3aO08759 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3aO08759 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3aO08759 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3aO08759 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3aO08759 Gm13036-201ENSMUST00000117799 748 ntBASIC15.28■□□□□ 0.04
Ube3aO08759 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.28■□□□□ 0.04
Ube3aO08759 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ube3aO08759 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3aO08759 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.28■□□□□ 0.04
Ube3aO08759 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.28■□□□□ 0.04
Ube3aO08759 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.28■□□□□ 0.04
Ube3aO08759 Psmb5-202ENSMUST00000227257 622 ntBASIC15.28■□□□□ 0.04
Ube3aO08759 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3aO08759 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3aO08759 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3aO08759 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3aO08759 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3aO08759 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3aO08759 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3aO08759 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ube3aO08759 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3aO08759 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3aO08759 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3aO08759 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3aO08759 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3aO08759 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ube3aO08759 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3aO08759 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ube3aO08759 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3aO08759 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3aO08759 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3aO08759 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.27■□□□□ 0.04
Ube3aO08759 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3aO08759 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3aO08759 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3aO08759 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3aO08759 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.27■□□□□ 0.04
Ube3aO08759 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3aO08759 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3aO08759 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3aO08759 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3aO08759 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3aO08759 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.27■□□□□ 0.04
Ube3aO08759 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3aO08759 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3aO08759 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ube3aO08759 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
Ube3aO08759 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3aO08759 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3aO08759 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3aO08759 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.27■□□□□ 0.04
Ube3aO08759 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3aO08759 Gm10275-202ENSMUST00000168697 495 ntBASIC15.27■□□□□ 0.04
Ube3aO08759 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3aO08759 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.27■□□□□ 0.04
Ube3aO08759 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.27■□□□□ 0.04
Ube3aO08759 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.27■□□□□ 0.04
Ube3aO08759 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.27■□□□□ 0.04
Ube3aO08759 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.27■□□□□ 0.04
Ube3aO08759 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.27■□□□□ 0.04
Ube3aO08759 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3aO08759 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3aO08759 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3aO08759 Gm10275-201ENSMUST00000092620 635 ntBASIC15.27■□□□□ 0.04
Ube3aO08759 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Ube3aO08759 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ube3aO08759 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ube3aO08759 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ube3aO08759 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ube3aO08759 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ube3aO08759 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ube3aO08759 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ube3aO08759 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.27■□□□□ 0.03
Ube3aO08759 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.27■□□□□ 0.03
Ube3aO08759 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ube3aO08759 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ube3aO08759 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ube3aO08759 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ube3aO08759 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms