Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Gm27459-201ENSMUST00000184860 107 ntBASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Shisa8J3QNX5 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shisa8J3QNX5 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Gm27300-201ENSMUST00000184085 97 ntBASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Gm27335-201ENSMUST00000184758 97 ntBASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Birc2-201ENSMUST00000054878 378 ntBASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Gm10819-201ENSMUST00000099988 561 ntBASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shisa8J3QNX5 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.9□□□□□ -0.35
Shisa8J3QNX5 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Shisa8J3QNX5 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Shisa8J3QNX5 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms