Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim55G3X8Y1 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim55G3X8Y1 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim55G3X8Y1 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim55G3X8Y1 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.52□□□□□ -0.08
Trim55G3X8Y1 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim55G3X8Y1 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim55G3X8Y1 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim55G3X8Y1 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim55G3X8Y1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.52□□□□□ -0.09
Trim55G3X8Y1 Gm21559-201ENSMUST00000220638 855 ntBASIC14.52□□□□□ -0.09
Trim55G3X8Y1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim55G3X8Y1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim55G3X8Y1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim55G3X8Y1 Gm8587-201ENSMUST00000076538 843 ntBASIC14.52□□□□□ -0.09
Trim55G3X8Y1 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trim55G3X8Y1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trim55G3X8Y1 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim55G3X8Y1 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim55G3X8Y1 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trim55G3X8Y1 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim55G3X8Y1 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim55G3X8Y1 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.52□□□□□ -0.09
Trim55G3X8Y1 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.52□□□□□ -0.09
Trim55G3X8Y1 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Mir1668-201ENSMUST00000184114 107 ntBASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim55G3X8Y1 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Gm27741-201ENSMUST00000185060 237 ntBASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Ank2-226ENSMUST00000189368 339 ntBASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 97.1 ms