Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NpcdF8VQB8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NpcdF8VQB8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NpcdF8VQB8 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NpcdF8VQB8 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NpcdF8VQB8 Gm10327-201ENSMUST00000105222 1002 ntBASIC16.95■□□□□ 0.3
NpcdF8VQB8 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NpcdF8VQB8 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
NpcdF8VQB8 Gm11524-201ENSMUST00000119349 807 ntBASIC16.95■□□□□ 0.3
NpcdF8VQB8 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NpcdF8VQB8 Gm9726-201ENSMUST00000180321 678 ntBASIC16.95■□□□□ 0.3
NpcdF8VQB8 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NpcdF8VQB8 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.95■□□□□ 0.3
NpcdF8VQB8 Gm7783-201ENSMUST00000204795 781 ntBASIC16.95■□□□□ 0.3
NpcdF8VQB8 Gm18905-201ENSMUST00000205454 928 ntBASIC16.95■□□□□ 0.3
NpcdF8VQB8 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.95■□□□□ 0.3
NpcdF8VQB8 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NpcdF8VQB8 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NpcdF8VQB8 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NpcdF8VQB8 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
NpcdF8VQB8 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NpcdF8VQB8 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NpcdF8VQB8 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
NpcdF8VQB8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NpcdF8VQB8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NpcdF8VQB8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NpcdF8VQB8 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NpcdF8VQB8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NpcdF8VQB8 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NpcdF8VQB8 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC16.94■□□□□ 0.3
NpcdF8VQB8 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NpcdF8VQB8 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.94■□□□□ 0.3
NpcdF8VQB8 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC16.94■□□□□ 0.3
NpcdF8VQB8 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NpcdF8VQB8 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NpcdF8VQB8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NpcdF8VQB8 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NpcdF8VQB8 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NpcdF8VQB8 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NpcdF8VQB8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NpcdF8VQB8 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC16.94■□□□□ 0.3
NpcdF8VQB8 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NpcdF8VQB8 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
NpcdF8VQB8 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NpcdF8VQB8 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
NpcdF8VQB8 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NpcdF8VQB8 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NpcdF8VQB8 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NpcdF8VQB8 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
NpcdF8VQB8 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NpcdF8VQB8 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NpcdF8VQB8 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
NpcdF8VQB8 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NpcdF8VQB8 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NpcdF8VQB8 Gm13612-201ENSMUST00000119276 390 ntBASIC16.93■□□□□ 0.3
NpcdF8VQB8 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NpcdF8VQB8 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NpcdF8VQB8 Gm2639-201ENSMUST00000156881 1297 ntBASIC16.93■□□□□ 0.3
NpcdF8VQB8 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.93■□□□□ 0.3
NpcdF8VQB8 Gm7584-201ENSMUST00000175829 940 ntBASIC16.93■□□□□ 0.3
NpcdF8VQB8 Mir8109-201ENSMUST00000184375 117 ntBASIC16.93■□□□□ 0.3
NpcdF8VQB8 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC16.93■□□□□ 0.3
NpcdF8VQB8 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.93■□□□□ 0.3
NpcdF8VQB8 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NpcdF8VQB8 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC16.93■□□□□ 0.3
NpcdF8VQB8 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NpcdF8VQB8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NpcdF8VQB8 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NpcdF8VQB8 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NpcdF8VQB8 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NpcdF8VQB8 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NpcdF8VQB8 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NpcdF8VQB8 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NpcdF8VQB8 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NpcdF8VQB8 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NpcdF8VQB8 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NpcdF8VQB8 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NpcdF8VQB8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NpcdF8VQB8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NpcdF8VQB8 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NpcdF8VQB8 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NpcdF8VQB8 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.92■□□□□ 0.3
NpcdF8VQB8 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NpcdF8VQB8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NpcdF8VQB8 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
NpcdF8VQB8 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC16.92■□□□□ 0.3
NpcdF8VQB8 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NpcdF8VQB8 Gm45880-201ENSMUST00000213041 853 ntBASIC16.92■□□□□ 0.3
NpcdF8VQB8 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC16.92■□□□□ 0.3
NpcdF8VQB8 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NpcdF8VQB8 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NpcdF8VQB8 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
NpcdF8VQB8 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
NpcdF8VQB8 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NpcdF8VQB8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NpcdF8VQB8 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NpcdF8VQB8 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NpcdF8VQB8 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NpcdF8VQB8 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NpcdF8VQB8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms