Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hfm1D3Z4R1 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Hfm1D3Z4R1 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hfm1D3Z4R1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hfm1D3Z4R1 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC19.52■□□□□ 0.72
Hfm1D3Z4R1 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hfm1D3Z4R1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hfm1D3Z4R1 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC19.52■□□□□ 0.71
Hfm1D3Z4R1 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hfm1D3Z4R1 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC19.51■□□□□ 0.71
Hfm1D3Z4R1 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hfm1D3Z4R1 Gm7046-201ENSMUST00000221351 977 ntBASIC19.51■□□□□ 0.71
Hfm1D3Z4R1 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hfm1D3Z4R1 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hfm1D3Z4R1 Gm3695-201ENSMUST00000087222 1009 ntBASIC19.51■□□□□ 0.71
Hfm1D3Z4R1 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hfm1D3Z4R1 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hfm1D3Z4R1 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Hfm1D3Z4R1 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC19.51■□□□□ 0.71
Hfm1D3Z4R1 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hfm1D3Z4R1 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hfm1D3Z4R1 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC19.51■□□□□ 0.71
Hfm1D3Z4R1 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hfm1D3Z4R1 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hfm1D3Z4R1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hfm1D3Z4R1 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hfm1D3Z4R1 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hfm1D3Z4R1 AC153366.2-201ENSMUST00000219461 1984 ntBASIC19.51■□□□□ 0.71
Hfm1D3Z4R1 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hfm1D3Z4R1 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hfm1D3Z4R1 Gm13886-201ENSMUST00000117876 1183 ntBASIC19.51■□□□□ 0.71
Hfm1D3Z4R1 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC19.51■□□□□ 0.71
Hfm1D3Z4R1 Gm5637-201ENSMUST00000153890 1119 ntBASIC19.51■□□□□ 0.71
Hfm1D3Z4R1 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hfm1D3Z4R1 Gm43068-201ENSMUST00000201095 1273 ntBASIC19.51■□□□□ 0.71
Hfm1D3Z4R1 Gm44064-201ENSMUST00000204964 1087 ntBASIC19.51■□□□□ 0.71
Hfm1D3Z4R1 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hfm1D3Z4R1 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hfm1D3Z4R1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hfm1D3Z4R1 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hfm1D3Z4R1 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hfm1D3Z4R1 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hfm1D3Z4R1 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hfm1D3Z4R1 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC19.5■□□□□ 0.71
Hfm1D3Z4R1 Gm44207-201ENSMUST00000204568 1424 ntBASIC19.5■□□□□ 0.71
Hfm1D3Z4R1 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hfm1D3Z4R1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hfm1D3Z4R1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hfm1D3Z4R1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hfm1D3Z4R1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hfm1D3Z4R1 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hfm1D3Z4R1 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Hfm1D3Z4R1 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Hfm1D3Z4R1 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Hfm1D3Z4R1 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hfm1D3Z4R1 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Hfm1D3Z4R1 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC19.5■□□□□ 0.71
Hfm1D3Z4R1 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC19.5■□□□□ 0.71
Hfm1D3Z4R1 AC131997.1-201ENSMUST00000228611 1229 ntBASIC19.5■□□□□ 0.71
Hfm1D3Z4R1 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hfm1D3Z4R1 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hfm1D3Z4R1 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Hfm1D3Z4R1 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hfm1D3Z4R1 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hfm1D3Z4R1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hfm1D3Z4R1 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hfm1D3Z4R1 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC19.49■□□□□ 0.71
Hfm1D3Z4R1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hfm1D3Z4R1 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hfm1D3Z4R1 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hfm1D3Z4R1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.49■□□□□ 0.71
Hfm1D3Z4R1 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Hfm1D3Z4R1 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hfm1D3Z4R1 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hfm1D3Z4R1 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hfm1D3Z4R1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hfm1D3Z4R1 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hfm1D3Z4R1 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hfm1D3Z4R1 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hfm1D3Z4R1 Gm14350-201ENSMUST00000116642 640 ntBASIC19.49■□□□□ 0.71
Hfm1D3Z4R1 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hfm1D3Z4R1 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hfm1D3Z4R1 Gm17376-201ENSMUST00000166016 84 ntBASIC19.49■□□□□ 0.71
Hfm1D3Z4R1 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC19.49■□□□□ 0.71
Hfm1D3Z4R1 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC19.49■□□□□ 0.71
Hfm1D3Z4R1 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hfm1D3Z4R1 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hfm1D3Z4R1 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hfm1D3Z4R1 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hfm1D3Z4R1 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hfm1D3Z4R1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hfm1D3Z4R1 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Hfm1D3Z4R1 Gm9867-201ENSMUST00000192212 2647 ntBASIC19.48■□□□□ 0.71
Hfm1D3Z4R1 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hfm1D3Z4R1 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hfm1D3Z4R1 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hfm1D3Z4R1 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hfm1D3Z4R1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Hfm1D3Z4R1 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hfm1D3Z4R1 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms