Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Gm3854A0A1B0GSS6 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm3854A0A1B0GSS6 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Gm3854A0A1B0GSS6 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm3854A0A1B0GSS6 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.11□□□□□ -0.15
Gm3854A0A1B0GSS6 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm3854A0A1B0GSS6 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm3854A0A1B0GSS6 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm3854A0A1B0GSS6 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.11□□□□□ -0.15
Gm3854A0A1B0GSS6 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.11□□□□□ -0.15
Gm3854A0A1B0GSS6 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm3854A0A1B0GSS6 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.11□□□□□ -0.15
Gm3854A0A1B0GSS6 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.11□□□□□ -0.15
Gm3854A0A1B0GSS6 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.11□□□□□ -0.15
Gm3854A0A1B0GSS6 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm3854A0A1B0GSS6 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Gm3854A0A1B0GSS6 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm3854A0A1B0GSS6 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Gm3854A0A1B0GSS6 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm3854A0A1B0GSS6 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm3854A0A1B0GSS6 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Gm3854A0A1B0GSS6 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm3854A0A1B0GSS6 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 Mir1894-201ENSMUST00000122802 81 ntBASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 Mir1982-201ENSMUST00000157368 74 ntBASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3854A0A1B0GSS6 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Gm43094-201ENSMUST00000196549 921 ntBASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms