Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm27300-201ENSMUST00000184085 97 ntBASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm27335-201ENSMUST00000184758 97 ntBASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Olfr286-202ENSMUST00000205305 969 ntBASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 AC161829.1-201ENSMUST00000220298 281 ntBASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm10154-201ENSMUST00000084445 354 ntBASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Mir8098-201ENSMUST00000184011 137 ntBASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm42670-201ENSMUST00000201816 1292 ntBASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm13615-201ENSMUST00000120242 1612 ntBASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm37691-201ENSMUST00000192147 2573 ntBASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm40377-201ENSMUST00000204604 2015 ntBASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms