Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Gm7820-201ENSMUST00000121012 1052 ntBASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Gm14767-201ENSMUST00000121559 586 ntBASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC17.15■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Gm27306-201ENSMUST00000183970 107 ntBASIC17.15■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atg4a-psA0A0G2JFS9 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atg4a-psA0A0G2JFS9 AC166491.1-201ENSMUST00000227053 2308 ntBASIC17.14■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC17.14■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Atg4a-psA0A0G2JFS9 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.14■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atg4a-psA0A0G2JFS9 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC17.13■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.13■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Atg4a-psA0A0G2JFS9 AC153872.1-201ENSMUST00000199539 128 ntBASIC17.13■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Mir497b-201ENSMUST00000093601 125 ntBASIC17.13■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Gm19863-201ENSMUST00000192480 2218 ntBASIC17.13■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms