Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm12644-201ENSMUST00000119935 606 ntBASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm18489-201ENSMUST00000172565 551 ntBASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm33142-201ENSMUST00000193913 867 ntBASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm29361-201ENSMUST00000183323 2000 ntBASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm7935-201ENSMUST00000100555 1278 ntBASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms