Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-5A0A075B6B9 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Gm5479-201ENSMUST00000160578 435 ntBASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Gm7230-201ENSMUST00000173026 815 ntBASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Gm6550-201ENSMUST00000187574 993 ntBASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Gm33142-201ENSMUST00000193913 867 ntBASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-5A0A075B6B9 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav6d-5A0A075B6B9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6d-5A0A075B6B9 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6d-5A0A075B6B9 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6d-5A0A075B6B9 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6d-5A0A075B6B9 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Trav6d-5A0A075B6B9 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav6d-5A0A075B6B9 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav6d-5A0A075B6B9 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms