Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC17.61■□□□□ 0.41
Hdac6Q9Z2V5 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac6Q9Z2V5 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC17.61■□□□□ 0.41
Hdac6Q9Z2V5 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Hdac6Q9Z2V5 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.61■□□□□ 0.41
Hdac6Q9Z2V5 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac6Q9Z2V5 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Hdac6Q9Z2V5 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac6Q9Z2V5 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac6Q9Z2V5 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac6Q9Z2V5 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac6Q9Z2V5 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac6Q9Z2V5 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac6Q9Z2V5 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Gm6013-201ENSMUST00000212264 699 ntBASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Gm7172-201ENSMUST00000218047 1152 ntBASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 AC155237.1-201ENSMUST00000226196 1279 ntBASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 CT030704.2-201ENSMUST00000228887 494 ntBASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.6■□□□□ 0.41
Hdac6Q9Z2V5 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 Gm10156-201ENSMUST00000122364 462 ntBASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 Gm29741-201ENSMUST00000192667 421 ntBASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac6Q9Z2V5 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hdac6Q9Z2V5 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.41
Hdac6Q9Z2V5 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Hdac6Q9Z2V5 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hdac6Q9Z2V5 Gm9347-201ENSMUST00000211473 1607 ntBASIC17.58■□□□□ 0.41
Hdac6Q9Z2V5 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hdac6Q9Z2V5 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hdac6Q9Z2V5 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hdac6Q9Z2V5 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Hdac6Q9Z2V5 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hdac6Q9Z2V5 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hdac6Q9Z2V5 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC17.58■□□□□ 0.4
Hdac6Q9Z2V5 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC17.58■□□□□ 0.4
Hdac6Q9Z2V5 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac6Q9Z2V5 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac6Q9Z2V5 Gm8801-201ENSMUST00000173255 1064 ntBASIC17.58■□□□□ 0.4
Hdac6Q9Z2V5 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac6Q9Z2V5 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC17.58■□□□□ 0.4
Hdac6Q9Z2V5 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac6Q9Z2V5 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac6Q9Z2V5 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms