Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Phf1Q9Z1B8 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Phf1Q9Z1B8 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Phf1Q9Z1B8 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.06□□□□□ -0.32
Phf1Q9Z1B8 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Phf1Q9Z1B8 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Phf1Q9Z1B8 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Phf1Q9Z1B8 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Phf1Q9Z1B8 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.06□□□□□ -0.32
Phf1Q9Z1B8 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.06□□□□□ -0.32
Phf1Q9Z1B8 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Phf1Q9Z1B8 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Phf1Q9Z1B8 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Phf1Q9Z1B8 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Gm5566-201ENSMUST00000116118 459 ntBASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Gm5866-201ENSMUST00000177881 973 ntBASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Phf1Q9Z1B8 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Gm9719-201ENSMUST00000162765 543 ntBASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Phf1Q9Z1B8 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Phf1Q9Z1B8 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
Phf1Q9Z1B8 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Phf1Q9Z1B8 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Phf1Q9Z1B8 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Phf1Q9Z1B8 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Phf1Q9Z1B8 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Phf1Q9Z1B8 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Phf1Q9Z1B8 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Phf1Q9Z1B8 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms