Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.36□□□□□ -0.11
Cldn3Q9Z0G9 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn3Q9Z0G9 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn3Q9Z0G9 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn3Q9Z0G9 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Cldn3Q9Z0G9 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn3Q9Z0G9 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn3Q9Z0G9 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn3Q9Z0G9 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.35□□□□□ -0.11
Cldn3Q9Z0G9 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.35□□□□□ -0.11
Cldn3Q9Z0G9 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.35□□□□□ -0.11
Cldn3Q9Z0G9 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.35□□□□□ -0.11
Cldn3Q9Z0G9 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.35□□□□□ -0.11
Cldn3Q9Z0G9 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.35□□□□□ -0.11
Cldn3Q9Z0G9 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.35□□□□□ -0.11
Cldn3Q9Z0G9 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn3Q9Z0G9 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn3Q9Z0G9 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn3Q9Z0G9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn3Q9Z0G9 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cldn3Q9Z0G9 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn3Q9Z0G9 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn3Q9Z0G9 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn3Q9Z0G9 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn3Q9Z0G9 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn3Q9Z0G9 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn3Q9Z0G9 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Cldn3Q9Z0G9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn3Q9Z0G9 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn3Q9Z0G9 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.11
Cldn3Q9Z0G9 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn3Q9Z0G9 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn3Q9Z0G9 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn3Q9Z0G9 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn3Q9Z0G9 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn3Q9Z0G9 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn3Q9Z0G9 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn3Q9Z0G9 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn3Q9Z0G9 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn3Q9Z0G9 BC001981-202ENSMUST00000191393 1545 ntBASIC14.33□□□□□ -0.12
Cldn3Q9Z0G9 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn3Q9Z0G9 Gm15957-201ENSMUST00000118893 974 ntBASIC14.33□□□□□ -0.12
Cldn3Q9Z0G9 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn3Q9Z0G9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn3Q9Z0G9 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms