Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube3bQ9ES34 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube3bQ9ES34 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube3bQ9ES34 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ube3bQ9ES34 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ube3bQ9ES34 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube3bQ9ES34 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.79■□□□□ 0.28
Ube3bQ9ES34 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.79■□□□□ 0.28
Ube3bQ9ES34 Gm8927-201ENSMUST00000181978 981 ntBASIC16.79■□□□□ 0.28
Ube3bQ9ES34 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.79■□□□□ 0.28
Ube3bQ9ES34 Gm3222-201ENSMUST00000071282 990 ntBASIC16.79■□□□□ 0.28
Ube3bQ9ES34 Mir497b-201ENSMUST00000093601 125 ntBASIC16.79■□□□□ 0.28
Ube3bQ9ES34 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.79■□□□□ 0.28
Ube3bQ9ES34 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ube3bQ9ES34 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube3bQ9ES34 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube3bQ9ES34 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ube3bQ9ES34 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube3bQ9ES34 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube3bQ9ES34 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ube3bQ9ES34 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
Ube3bQ9ES34 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube3bQ9ES34 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.78■□□□□ 0.28
Ube3bQ9ES34 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Gm5279-201ENSMUST00000199575 745 ntBASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube3bQ9ES34 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ube3bQ9ES34 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Ube3bQ9ES34 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ube3bQ9ES34 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ube3bQ9ES34 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ube3bQ9ES34 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ube3bQ9ES34 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ube3bQ9ES34 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ube3bQ9ES34 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ube3bQ9ES34 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.77■□□□□ 0.28
Ube3bQ9ES34 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.77■□□□□ 0.28
Ube3bQ9ES34 Gm29741-201ENSMUST00000192667 421 ntBASIC16.77■□□□□ 0.28
Ube3bQ9ES34 Gm18905-201ENSMUST00000205454 928 ntBASIC16.77■□□□□ 0.28
Ube3bQ9ES34 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.77■□□□□ 0.28
Ube3bQ9ES34 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Ube3bQ9ES34 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Ube3bQ9ES34 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ube3bQ9ES34 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ube3bQ9ES34 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ube3bQ9ES34 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ube3bQ9ES34 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ube3bQ9ES34 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ube3bQ9ES34 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ube3bQ9ES34 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.77■□□□□ 0.27
Ube3bQ9ES34 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ube3bQ9ES34 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ube3bQ9ES34 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ube3bQ9ES34 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube3bQ9ES34 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ube3bQ9ES34 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.76■□□□□ 0.27
Ube3bQ9ES34 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube3bQ9ES34 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Ube3bQ9ES34 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ube3bQ9ES34 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube3bQ9ES34 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ube3bQ9ES34 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ube3bQ9ES34 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.76■□□□□ 0.27
Ube3bQ9ES34 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.76■□□□□ 0.27
Ube3bQ9ES34 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube3bQ9ES34 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube3bQ9ES34 Gm25007-201ENSMUST00000083808 133 ntBASIC16.76■□□□□ 0.27
Ube3bQ9ES34 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.76■□□□□ 0.27
Ube3bQ9ES34 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ube3bQ9ES34 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube3bQ9ES34 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ube3bQ9ES34 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms