Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpne8Q9DC53 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpne8Q9DC53 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Cpne8Q9DC53 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.77□□□□□ -0.05
Cpne8Q9DC53 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.77□□□□□ -0.05
Cpne8Q9DC53 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpne8Q9DC53 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cpne8Q9DC53 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cpne8Q9DC53 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpne8Q9DC53 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpne8Q9DC53 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Cpne8Q9DC53 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Gm18766-201ENSMUST00000189811 808 ntBASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpne8Q9DC53 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne8Q9DC53 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne8Q9DC53 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne8Q9DC53 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne8Q9DC53 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne8Q9DC53 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne8Q9DC53 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne8Q9DC53 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne8Q9DC53 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne8Q9DC53 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.75□□□□□ -0.05
Cpne8Q9DC53 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.75□□□□□ -0.05
Cpne8Q9DC53 Gm43474-201ENSMUST00000196415 774 ntBASIC14.75□□□□□ -0.05
Cpne8Q9DC53 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne8Q9DC53 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne8Q9DC53 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne8Q9DC53 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne8Q9DC53 BC001981-202ENSMUST00000191393 1545 ntBASIC14.75□□□□□ -0.05
Cpne8Q9DC53 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne8Q9DC53 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne8Q9DC53 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cpne8Q9DC53 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne8Q9DC53 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cpne8Q9DC53 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne8Q9DC53 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne8Q9DC53 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne8Q9DC53 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne8Q9DC53 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne8Q9DC53 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cpne8Q9DC53 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.74□□□□□ -0.05
Cpne8Q9DC53 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne8Q9DC53 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.74□□□□□ -0.05
Cpne8Q9DC53 Gm27631-201ENSMUST00000184163 466 ntBASIC14.74□□□□□ -0.05
Cpne8Q9DC53 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne8Q9DC53 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne8Q9DC53 Grk6-205ENSMUST00000224653 2976 ntBASIC14.74□□□□□ -0.05
Cpne8Q9DC53 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne8Q9DC53 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne8Q9DC53 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne8Q9DC53 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cpne8Q9DC53 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.74□□□□□ -0.05
Cpne8Q9DC53 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpne8Q9DC53 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms