Protein–RNA interactions for Protein: Q9D6F9

Tubb4a, Tubulin beta-4A chain, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb4aQ9D6F9 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubb4aQ9D6F9 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubb4aQ9D6F9 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubb4aQ9D6F9 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubb4aQ9D6F9 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubb4aQ9D6F9 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Tubb4aQ9D6F9 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Tubb4aQ9D6F9 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tubb4aQ9D6F9 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Tubb4aQ9D6F9 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubb4aQ9D6F9 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.29■□□□□ 0.04
Tubb4aQ9D6F9 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubb4aQ9D6F9 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Gm10275-202ENSMUST00000168697 495 ntBASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Gm10275-201ENSMUST00000092620 635 ntBASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb4aQ9D6F9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tubb4aQ9D6F9 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.27■□□□□ 0.04
Tubb4aQ9D6F9 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubb4aQ9D6F9 Gm27194-201ENSMUST00000175753 2936 ntBASIC15.27■□□□□ 0.04
Tubb4aQ9D6F9 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Tubb4aQ9D6F9 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubb4aQ9D6F9 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.27■□□□□ 0.04
Tubb4aQ9D6F9 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubb4aQ9D6F9 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubb4aQ9D6F9 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Tubb4aQ9D6F9 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.27■□□□□ 0.04
Tubb4aQ9D6F9 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tubb4aQ9D6F9 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Tubb4aQ9D6F9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
Tubb4aQ9D6F9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Tubb4aQ9D6F9 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubb4aQ9D6F9 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Tubb4aQ9D6F9 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubb4aQ9D6F9 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tubb4aQ9D6F9 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Tubb4aQ9D6F9 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubb4aQ9D6F9 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tubb4aQ9D6F9 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tubb4aQ9D6F9 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tubb4aQ9D6F9 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubb4aQ9D6F9 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubb4aQ9D6F9 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubb4aQ9D6F9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Tubb4aQ9D6F9 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Tubb4aQ9D6F9 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubb4aQ9D6F9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.26■□□□□ 0.03
Tubb4aQ9D6F9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubb4aQ9D6F9 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tubb4aQ9D6F9 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubb4aQ9D6F9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubb4aQ9D6F9 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.26■□□□□ 0.03
Tubb4aQ9D6F9 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.26■□□□□ 0.03
Tubb4aQ9D6F9 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.26■□□□□ 0.03
Tubb4aQ9D6F9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tubb4aQ9D6F9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubb4aQ9D6F9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.26■□□□□ 0.03
Tubb4aQ9D6F9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.26■□□□□ 0.03
Tubb4aQ9D6F9 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.26■□□□□ 0.03
Tubb4aQ9D6F9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tubb4aQ9D6F9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubb4aQ9D6F9 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubb4aQ9D6F9 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tubb4aQ9D6F9 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubb4aQ9D6F9 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms