Protein–RNA interactions for Protein: Q9CVD2

Atxn3, Ataxin-3, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn3Q9CVD2 Gm42471-201ENSMUST00000201457 1865 ntBASIC18.2■□□□□ 0.5
Atxn3Q9CVD2 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atxn3Q9CVD2 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atxn3Q9CVD2 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atxn3Q9CVD2 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
Atxn3Q9CVD2 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atxn3Q9CVD2 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atxn3Q9CVD2 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Atxn3Q9CVD2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Atxn3Q9CVD2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Atxn3Q9CVD2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atxn3Q9CVD2 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC18.19■□□□□ 0.5
Atxn3Q9CVD2 Gm29667-201ENSMUST00000190817 490 ntBASIC18.19■□□□□ 0.5
Atxn3Q9CVD2 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC18.19■□□□□ 0.5
Atxn3Q9CVD2 AC124751.1-201ENSMUST00000222716 1408 ntBASIC18.19■□□□□ 0.5
Atxn3Q9CVD2 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atxn3Q9CVD2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atxn3Q9CVD2 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atxn3Q9CVD2 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atxn3Q9CVD2 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atxn3Q9CVD2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atxn3Q9CVD2 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atxn3Q9CVD2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atxn3Q9CVD2 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Atxn3Q9CVD2 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC18.18■□□□□ 0.5
Atxn3Q9CVD2 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Atxn3Q9CVD2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Atxn3Q9CVD2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC18.18■□□□□ 0.5
Atxn3Q9CVD2 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atxn3Q9CVD2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Atxn3Q9CVD2 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Atxn3Q9CVD2 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC18.18■□□□□ 0.5
Atxn3Q9CVD2 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC18.18■□□□□ 0.5
Atxn3Q9CVD2 Gm14719-201ENSMUST00000121891 340 ntBASIC18.18■□□□□ 0.5
Atxn3Q9CVD2 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Atxn3Q9CVD2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC18.18■□□□□ 0.5
Atxn3Q9CVD2 Gm18027-201ENSMUST00000218947 619 ntBASIC18.18■□□□□ 0.5
Atxn3Q9CVD2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atxn3Q9CVD2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atxn3Q9CVD2 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atxn3Q9CVD2 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Atxn3Q9CVD2 Gm26513-201ENSMUST00000181802 2489 ntBASIC18.18■□□□□ 0.5
Atxn3Q9CVD2 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atxn3Q9CVD2 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Atxn3Q9CVD2 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Atxn3Q9CVD2 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atxn3Q9CVD2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atxn3Q9CVD2 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atxn3Q9CVD2 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atxn3Q9CVD2 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atxn3Q9CVD2 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atxn3Q9CVD2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Atxn3Q9CVD2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atxn3Q9CVD2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Atxn3Q9CVD2 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atxn3Q9CVD2 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atxn3Q9CVD2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC18.17■□□□□ 0.5
Atxn3Q9CVD2 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atxn3Q9CVD2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Atxn3Q9CVD2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
Atxn3Q9CVD2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atxn3Q9CVD2 Mir8102-201ENSMUST00000184148 139 ntBASIC18.17■□□□□ 0.5
Atxn3Q9CVD2 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC18.17■□□□□ 0.5
Atxn3Q9CVD2 AC132863.2-201ENSMUST00000226643 799 ntBASIC18.17■□□□□ 0.5
Atxn3Q9CVD2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC18.17■□□□□ 0.5
Atxn3Q9CVD2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atxn3Q9CVD2 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atxn3Q9CVD2 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atxn3Q9CVD2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atxn3Q9CVD2 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atxn3Q9CVD2 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atxn3Q9CVD2 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atxn3Q9CVD2 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atxn3Q9CVD2 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atxn3Q9CVD2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atxn3Q9CVD2 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atxn3Q9CVD2 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atxn3Q9CVD2 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atxn3Q9CVD2 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atxn3Q9CVD2 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Atxn3Q9CVD2 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Atxn3Q9CVD2 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atxn3Q9CVD2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atxn3Q9CVD2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC18.16■□□□□ 0.5
Atxn3Q9CVD2 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atxn3Q9CVD2 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atxn3Q9CVD2 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atxn3Q9CVD2 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Atxn3Q9CVD2 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Atxn3Q9CVD2 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Atxn3Q9CVD2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Atxn3Q9CVD2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atxn3Q9CVD2 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Atxn3Q9CVD2 Mir7684-201ENSMUST00000183858 60 ntBASIC18.16■□□□□ 0.5
Atxn3Q9CVD2 AC153872.1-201ENSMUST00000199539 128 ntBASIC18.16■□□□□ 0.5
Atxn3Q9CVD2 AC238811.1-201ENSMUST00000225302 441 ntBASIC18.16■□□□□ 0.5
Atxn3Q9CVD2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atxn3Q9CVD2 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Atxn3Q9CVD2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atxn3Q9CVD2 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms