Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sft2d3Q9CSV6 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Gm8410-201ENSMUST00000117225 605 ntBASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sft2d3Q9CSV6 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.47
Sft2d3Q9CSV6 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Sft2d3Q9CSV6 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Gm6415-201ENSMUST00000118488 348 ntBASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms