Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lrrc40Q9CRC8 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lrrc40Q9CRC8 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.08□□□□□ -0.16
Lrrc40Q9CRC8 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Lrrc40Q9CRC8 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lrrc40Q9CRC8 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lrrc40Q9CRC8 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Gm13365-201ENSMUST00000121188 973 ntBASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrrc40Q9CRC8 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 BC001981-202ENSMUST00000191393 1545 ntBASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 Gm9824-201ENSMUST00000178707 561 ntBASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrrc40Q9CRC8 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lrrc40Q9CRC8 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.05□□□□□ -0.16
Lrrc40Q9CRC8 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lrrc40Q9CRC8 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lrrc40Q9CRC8 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lrrc40Q9CRC8 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lrrc40Q9CRC8 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lrrc40Q9CRC8 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lrrc40Q9CRC8 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lrrc40Q9CRC8 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lrrc40Q9CRC8 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lrrc40Q9CRC8 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lrrc40Q9CRC8 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lrrc40Q9CRC8 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lrrc40Q9CRC8 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lrrc40Q9CRC8 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lrrc40Q9CRC8 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.05□□□□□ -0.16
Lrrc40Q9CRC8 Gm4995-201ENSMUST00000117247 432 ntBASIC14.05□□□□□ -0.16
Lrrc40Q9CRC8 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.05□□□□□ -0.16
Lrrc40Q9CRC8 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.05□□□□□ -0.16
Lrrc40Q9CRC8 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.05□□□□□ -0.16
Lrrc40Q9CRC8 Mir6990-201ENSMUST00000183724 91 ntBASIC14.05□□□□□ -0.16
Lrrc40Q9CRC8 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.05□□□□□ -0.16
Lrrc40Q9CRC8 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms