Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldnd1Q9CQX5 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldnd1Q9CQX5 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cldnd1Q9CQX5 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldnd1Q9CQX5 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldnd1Q9CQX5 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldnd1Q9CQX5 Gm38002-201ENSMUST00000193255 180 ntBASIC14.4□□□□□ -0.1
Cldnd1Q9CQX5 Gm19309-201ENSMUST00000218295 205 ntBASIC14.4□□□□□ -0.1
Cldnd1Q9CQX5 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldnd1Q9CQX5 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldnd1Q9CQX5 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldnd1Q9CQX5 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldnd1Q9CQX5 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldnd1Q9CQX5 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldnd1Q9CQX5 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldnd1Q9CQX5 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldnd1Q9CQX5 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.4□□□□□ -0.1
Cldnd1Q9CQX5 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldnd1Q9CQX5 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Gm27331-201ENSMUST00000183705 60 ntBASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Gm29705-201ENSMUST00000212598 474 ntBASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Gm8598-201ENSMUST00000221184 836 ntBASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Gm45930-201ENSMUST00000221330 292 ntBASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cldnd1Q9CQX5 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Gm27501-201ENSMUST00000183599 107 ntBASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Gm4857-201ENSMUST00000192718 785 ntBASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Gm7783-201ENSMUST00000204795 781 ntBASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms