Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Krt88Q9CPR6 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Krt88Q9CPR6 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Krt88Q9CPR6 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Krt88Q9CPR6 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Krt88Q9CPR6 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Krt88Q9CPR6 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Krt88Q9CPR6 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Krt88Q9CPR6 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Krt88Q9CPR6 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Krt88Q9CPR6 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Krt88Q9CPR6 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Krt88Q9CPR6 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Krt88Q9CPR6 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Krt88Q9CPR6 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.77□□□□□ -0.37
Krt88Q9CPR6 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Krt88Q9CPR6 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Krt88Q9CPR6 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Gm44357-201ENSMUST00000195897 142 ntBASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Gm19658-201ENSMUST00000196231 138 ntBASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Gm44367-201ENSMUST00000196836 138 ntBASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Gm44350-201ENSMUST00000197197 138 ntBASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Gm44390-201ENSMUST00000197533 144 ntBASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Gm44313-201ENSMUST00000198018 138 ntBASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Gm44486-201ENSMUST00000198508 138 ntBASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Gm44314-201ENSMUST00000199263 138 ntBASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Gm44394-201ENSMUST00000199558 138 ntBASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Gm44484-201ENSMUST00000199873 138 ntBASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Gm44466-201ENSMUST00000200264 138 ntBASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Gm44359-201ENSMUST00000200671 138 ntBASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.77□□□□□ -0.37
Krt88Q9CPR6 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt88Q9CPR6 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt88Q9CPR6 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt88Q9CPR6 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt88Q9CPR6 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt88Q9CPR6 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt88Q9CPR6 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt88Q9CPR6 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
Krt88Q9CPR6 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Krt88Q9CPR6 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Krt88Q9CPR6 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt88Q9CPR6 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt88Q9CPR6 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt88Q9CPR6 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.76□□□□□ -0.37
Krt88Q9CPR6 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.76□□□□□ -0.37
Krt88Q9CPR6 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.76□□□□□ -0.37
Krt88Q9CPR6 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt88Q9CPR6 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Krt88Q9CPR6 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.76□□□□□ -0.37
Krt88Q9CPR6 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.76□□□□□ -0.37
Krt88Q9CPR6 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms