Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkd1Q99MH6 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkd1Q99MH6 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkd1Q99MH6 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.37□□□□□ -0.27
Nkd1Q99MH6 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Nkd1Q99MH6 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Nkd1Q99MH6 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkd1Q99MH6 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Nkd1Q99MH6 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkd1Q99MH6 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkd1Q99MH6 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkd1Q99MH6 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Gm9385-201ENSMUST00000117563 472 ntBASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Gm5479-201ENSMUST00000160578 435 ntBASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Nkd1Q99MH6 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.35□□□□□ -0.27
Nkd1Q99MH6 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkd1Q99MH6 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkd1Q99MH6 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkd1Q99MH6 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkd1Q99MH6 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
Nkd1Q99MH6 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nkd1Q99MH6 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nkd1Q99MH6 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Nkd1Q99MH6 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.35□□□□□ -0.27
Nkd1Q99MH6 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nkd1Q99MH6 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.35□□□□□ -0.27
Nkd1Q99MH6 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.35□□□□□ -0.27
Nkd1Q99MH6 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkd1Q99MH6 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkd1Q99MH6 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkd1Q99MH6 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkd1Q99MH6 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkd1Q99MH6 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkd1Q99MH6 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nkd1Q99MH6 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Nkd1Q99MH6 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkd1Q99MH6 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Nkd1Q99MH6 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd1Q99MH6 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd1Q99MH6 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd1Q99MH6 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd1Q99MH6 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd1Q99MH6 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd1Q99MH6 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd1Q99MH6 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.34□□□□□ -0.27
Nkd1Q99MH6 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Nkd1Q99MH6 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd1Q99MH6 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.34□□□□□ -0.27
Nkd1Q99MH6 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd1Q99MH6 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd1Q99MH6 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.34□□□□□ -0.27
Nkd1Q99MH6 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.34□□□□□ -0.27
Nkd1Q99MH6 Gm15483-201ENSMUST00000120338 456 ntBASIC13.34□□□□□ -0.27
Nkd1Q99MH6 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd1Q99MH6 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.34□□□□□ -0.27
Nkd1Q99MH6 Gm45747-201ENSMUST00000212203 999 ntBASIC13.34□□□□□ -0.27
Nkd1Q99MH6 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd1Q99MH6 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd1Q99MH6 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms