Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb18Q91Y02 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb18Q91Y02 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb18Q91Y02 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb18Q91Y02 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb18Q91Y02 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Gm11918-201ENSMUST00000121660 179 ntBASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Gm19220-201ENSMUST00000222682 803 ntBASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb18Q91Y02 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhb18Q91Y02 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb18Q91Y02 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb18Q91Y02 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb18Q91Y02 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb18Q91Y02 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb18Q91Y02 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb18Q91Y02 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb18Q91Y02 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.8□□□□□ -0.04
Pcdhb18Q91Y02 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhb18Q91Y02 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.8□□□□□ -0.04
Pcdhb18Q91Y02 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb18Q91Y02 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.8□□□□□ -0.04
Pcdhb18Q91Y02 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.8□□□□□ -0.04
Pcdhb18Q91Y02 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb18Q91Y02 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.8□□□□□ -0.04
Pcdhb18Q91Y02 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb18Q91Y02 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb18Q91Y02 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb18Q91Y02 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb18Q91Y02 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhb18Q91Y02 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb18Q91Y02 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhb18Q91Y02 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms