Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb3Q91XZ7 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhb3Q91XZ7 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb3Q91XZ7 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.21□□□□□ -0.13
Pcdhb3Q91XZ7 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdhb3Q91XZ7 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb3Q91XZ7 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhb3Q91XZ7 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhb3Q91XZ7 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb3Q91XZ7 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb3Q91XZ7 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.21□□□□□ -0.13
Pcdhb3Q91XZ7 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdhb3Q91XZ7 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb3Q91XZ7 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb3Q91XZ7 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Pcdhb3Q91XZ7 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.21□□□□□ -0.13
Pcdhb3Q91XZ7 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb3Q91XZ7 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb3Q91XZ7 Gm9727-201ENSMUST00000161387 555 ntBASIC14.21□□□□□ -0.13
Pcdhb3Q91XZ7 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb3Q91XZ7 Gm37153-201ENSMUST00000193637 231 ntBASIC14.21□□□□□ -0.13
Pcdhb3Q91XZ7 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.21□□□□□ -0.13
Pcdhb3Q91XZ7 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pcdhb3Q91XZ7 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb3Q91XZ7 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb3Q91XZ7 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb3Q91XZ7 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb3Q91XZ7 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb3Q91XZ7 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Pcdhb3Q91XZ7 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb3Q91XZ7 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb3Q91XZ7 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb3Q91XZ7 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb3Q91XZ7 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb3Q91XZ7 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Pcdhb3Q91XZ7 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb3Q91XZ7 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb3Q91XZ7 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Pcdhb3Q91XZ7 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Gm12260-201ENSMUST00000122447 411 ntBASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Gm8318-201ENSMUST00000182954 872 ntBASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Gm37436-201ENSMUST00000193842 1085 ntBASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Gm2213-201ENSMUST00000197485 688 ntBASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb3Q91XZ7 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms