Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.28■□□□□ 0.2
Ddx41Q91VN6 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Ddx41Q91VN6 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx41Q91VN6 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.28■□□□□ 0.2
Ddx41Q91VN6 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx41Q91VN6 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.28■□□□□ 0.2
Ddx41Q91VN6 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx41Q91VN6 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx41Q91VN6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
Ddx41Q91VN6 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx41Q91VN6 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx41Q91VN6 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx41Q91VN6 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx41Q91VN6 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx41Q91VN6 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.28■□□□□ 0.2
Ddx41Q91VN6 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx41Q91VN6 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ddx41Q91VN6 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx41Q91VN6 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Ddx41Q91VN6 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx41Q91VN6 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx41Q91VN6 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx41Q91VN6 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx41Q91VN6 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx41Q91VN6 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.27■□□□□ 0.2
Ddx41Q91VN6 Gm15487-201ENSMUST00000122373 465 ntBASIC16.27■□□□□ 0.2
Ddx41Q91VN6 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.27■□□□□ 0.2
Ddx41Q91VN6 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx41Q91VN6 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx41Q91VN6 Olfr286-202ENSMUST00000205305 969 ntBASIC16.27■□□□□ 0.2
Ddx41Q91VN6 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.27■□□□□ 0.2
Ddx41Q91VN6 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx41Q91VN6 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx41Q91VN6 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ddx41Q91VN6 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx41Q91VN6 Gm2423-201ENSMUST00000074863 733 ntBASIC16.27■□□□□ 0.2
Ddx41Q91VN6 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx41Q91VN6 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ddx41Q91VN6 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ddx41Q91VN6 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Ddx41Q91VN6 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Ddx41Q91VN6 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ddx41Q91VN6 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ddx41Q91VN6 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx41Q91VN6 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx41Q91VN6 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx41Q91VN6 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx41Q91VN6 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx41Q91VN6 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC16.26■□□□□ 0.19
Ddx41Q91VN6 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.26■□□□□ 0.19
Ddx41Q91VN6 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx41Q91VN6 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC16.26■□□□□ 0.19
Ddx41Q91VN6 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx41Q91VN6 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.26■□□□□ 0.19
Ddx41Q91VN6 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.26■□□□□ 0.19
Ddx41Q91VN6 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx41Q91VN6 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx41Q91VN6 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx41Q91VN6 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx41Q91VN6 Ankra2-208ENSMUST00000226100 1476 ntBASIC16.26■□□□□ 0.19
Ddx41Q91VN6 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ddx41Q91VN6 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx41Q91VN6 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.26■□□□□ 0.19
Ddx41Q91VN6 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx41Q91VN6 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx41Q91VN6 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.26■□□□□ 0.19
Ddx41Q91VN6 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx41Q91VN6 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx41Q91VN6 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx41Q91VN6 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Ddx41Q91VN6 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx41Q91VN6 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx41Q91VN6 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx41Q91VN6 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ddx41Q91VN6 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx41Q91VN6 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx41Q91VN6 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx41Q91VN6 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx41Q91VN6 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx41Q91VN6 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx41Q91VN6 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx41Q91VN6 Gm14719-201ENSMUST00000121891 340 ntBASIC16.25■□□□□ 0.19
Ddx41Q91VN6 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.25■□□□□ 0.19
Ddx41Q91VN6 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx41Q91VN6 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.25■□□□□ 0.19
Ddx41Q91VN6 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx41Q91VN6 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.25■□□□□ 0.19
Ddx41Q91VN6 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx41Q91VN6 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx41Q91VN6 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx41Q91VN6 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx41Q91VN6 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx41Q91VN6 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx41Q91VN6 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx41Q91VN6 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx41Q91VN6 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.25■□□□□ 0.19
Ddx41Q91VN6 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx41Q91VN6 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ddx41Q91VN6 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx41Q91VN6 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms