Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Q8VDP2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Q8VDP2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Q8VDP2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Q8VDP2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Q8VDP2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Q8VDP2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Q8VDP2 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Q8VDP2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Q8VDP2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Q8VDP2 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Q8VDP2 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.82□□□□□ -0.2
Q8VDP2 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Q8VDP2 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Q8VDP2 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Q8VDP2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Q8VDP2 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Q8VDP2 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Q8VDP2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Q8VDP2 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.81□□□□□ -0.2
Q8VDP2 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Q8VDP2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Q8VDP2 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Q8VDP2 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.81□□□□□ -0.2
Q8VDP2 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Q8VDP2 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC13.81□□□□□ -0.2
Q8VDP2 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Q8VDP2 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Q8VDP2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Q8VDP2 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Q8VDP2 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Q8VDP2 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Q8VDP2 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Q8VDP2 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Q8VDP2 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.81□□□□□ -0.2
Q8VDP2 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Q8VDP2 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Q8VDP2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.81□□□□□ -0.2
Q8VDP2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.81□□□□□ -0.2
Q8VDP2 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Q8VDP2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.81□□□□□ -0.2
Q8VDP2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Q8VDP2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Q8VDP2 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Q8VDP2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Q8VDP2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Q8VDP2 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Q8VDP2 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Q8VDP2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Q8VDP2 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Q8VDP2 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Q8VDP2 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Q8VDP2 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Q8VDP2 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Q8VDP2 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.81□□□□□ -0.2
Q8VDP2 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Q8VDP2 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.8□□□□□ -0.2
Q8VDP2 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Q8VDP2 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q8VDP2 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q8VDP2 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q8VDP2 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q8VDP2 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.8□□□□□ -0.2
Q8VDP2 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q8VDP2 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q8VDP2 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Q8VDP2 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Q8VDP2 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Q8VDP2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q8VDP2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Q8VDP2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.8□□□□□ -0.2
Q8VDP2 Gm7284-201ENSMUST00000131667 944 ntBASIC13.8□□□□□ -0.2
Q8VDP2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.8□□□□□ -0.2
Q8VDP2 Gm38114-201ENSMUST00000191877 1232 ntBASIC13.8□□□□□ -0.2
Q8VDP2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Q8VDP2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q8VDP2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.8□□□□□ -0.2
Q8VDP2 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q8VDP2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q8VDP2 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Q8VDP2 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q8VDP2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.8□□□□□ -0.2
Q8VDP2 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Q8VDP2 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q8VDP2 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q8VDP2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q8VDP2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q8VDP2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Q8VDP2 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q8VDP2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Q8VDP2 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.8□□□□□ -0.2
Q8VDP2 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q8VDP2 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Q8VDP2 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q8VDP2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q8VDP2 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q8VDP2 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Q8VDP2 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q8VDP2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q8VDP2 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms