Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc58Q8R3Q6 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc58Q8R3Q6 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc58Q8R3Q6 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc58Q8R3Q6 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc58Q8R3Q6 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc58Q8R3Q6 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc58Q8R3Q6 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc58Q8R3Q6 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc58Q8R3Q6 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.73□□□□□ -0.37
Ccdc58Q8R3Q6 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.73□□□□□ -0.37
Ccdc58Q8R3Q6 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.73□□□□□ -0.37
Ccdc58Q8R3Q6 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc58Q8R3Q6 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc58Q8R3Q6 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc58Q8R3Q6 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Gm18246-201ENSMUST00000221023 728 ntBASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc58Q8R3Q6 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc58Q8R3Q6 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc58Q8R3Q6 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc58Q8R3Q6 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.71□□□□□ -0.37
Ccdc58Q8R3Q6 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc58Q8R3Q6 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ccdc58Q8R3Q6 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
Ccdc58Q8R3Q6 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.71□□□□□ -0.37
Ccdc58Q8R3Q6 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ccdc58Q8R3Q6 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc58Q8R3Q6 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc58Q8R3Q6 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc58Q8R3Q6 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc58Q8R3Q6 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.71□□□□□ -0.37
Ccdc58Q8R3Q6 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Ccdc58Q8R3Q6 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ccdc58Q8R3Q6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.71□□□□□ -0.37
Ccdc58Q8R3Q6 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc58Q8R3Q6 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.71□□□□□ -0.37
Ccdc58Q8R3Q6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc58Q8R3Q6 Gm18669-201ENSMUST00000216049 778 ntBASIC12.71□□□□□ -0.37
Ccdc58Q8R3Q6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc58Q8R3Q6 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc58Q8R3Q6 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc58Q8R3Q6 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc58Q8R3Q6 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc58Q8R3Q6 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc58Q8R3Q6 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.71□□□□□ -0.38
Ccdc58Q8R3Q6 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc58Q8R3Q6 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc58Q8R3Q6 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Ccdc58Q8R3Q6 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc58Q8R3Q6 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc58Q8R3Q6 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.7□□□□□ -0.38
Ccdc58Q8R3Q6 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc58Q8R3Q6 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.7□□□□□ -0.38
Ccdc58Q8R3Q6 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc58Q8R3Q6 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc58Q8R3Q6 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc58Q8R3Q6 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc58Q8R3Q6 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc58Q8R3Q6 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.7□□□□□ -0.38
Ccdc58Q8R3Q6 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.7□□□□□ -0.38
Ccdc58Q8R3Q6 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms