Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.88■□□□□ 0.13
Ushbp1Q8R370 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ushbp1Q8R370 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ushbp1Q8R370 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ushbp1Q8R370 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ushbp1Q8R370 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.88■□□□□ 0.13
Ushbp1Q8R370 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ushbp1Q8R370 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ushbp1Q8R370 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ushbp1Q8R370 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ushbp1Q8R370 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ushbp1Q8R370 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.88■□□□□ 0.13
Ushbp1Q8R370 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ushbp1Q8R370 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ushbp1Q8R370 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ushbp1Q8R370 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
Ushbp1Q8R370 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ushbp1Q8R370 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ushbp1Q8R370 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Syt7-205ENSMUST00000224135 1557 ntBASIC15.87■□□□□ 0.13
Ushbp1Q8R370 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Gm16215-201ENSMUST00000161990 637 ntBASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Gm29541-201ENSMUST00000191351 678 ntBASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ushbp1Q8R370 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Gm13015-201ENSMUST00000118674 204 ntBASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Gm18049-201ENSMUST00000208909 581 ntBASIC15.86■□□□□ 0.13
Ushbp1Q8R370 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.86■□□□□ 0.13
Ushbp1Q8R370 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ushbp1Q8R370 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms