Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Gm5912-201ENSMUST00000122282 1438 ntBASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 AC114008.2-201ENSMUST00000227699 1347 ntBASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Gm24420-201ENSMUST00000176676 59 ntBASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Gm2495-201ENSMUST00000191160 466 ntBASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Gm7067-201ENSMUST00000207698 1249 ntBASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 AC192088.1-201ENSMUST00000227561 301 ntBASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 AC125117.1-201ENSMUST00000228121 468 ntBASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp7Q8R1T1 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Gm15429-201ENSMUST00000151268 798 ntBASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 AY702102-202ENSMUST00000194651 1173 ntBASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Gm9899-201ENSMUST00000065519 555 ntBASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp7Q8R1T1 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Chmp7Q8R1T1 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp7Q8R1T1 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Chmp7Q8R1T1 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp7Q8R1T1 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp7Q8R1T1 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp7Q8R1T1 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp7Q8R1T1 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Chmp7Q8R1T1 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp7Q8R1T1 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp7Q8R1T1 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp7Q8R1T1 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp7Q8R1T1 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp7Q8R1T1 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC18.02■□□□□ 0.48
Chmp7Q8R1T1 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC18.02■□□□□ 0.48
Chmp7Q8R1T1 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp7Q8R1T1 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
Chmp7Q8R1T1 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms