Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Zcchc9Q8R1J3 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Zcchc9Q8R1J3 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Zcchc9Q8R1J3 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Zcchc9Q8R1J3 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Zcchc9Q8R1J3 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.16□□□□□ -0.14
Zcchc9Q8R1J3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Zcchc9Q8R1J3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Zcchc9Q8R1J3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.16□□□□□ -0.14
Zcchc9Q8R1J3 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.16□□□□□ -0.14
Zcchc9Q8R1J3 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Zcchc9Q8R1J3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Zcchc9Q8R1J3 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Zcchc9Q8R1J3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Zcchc9Q8R1J3 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Gm22189-201ENSMUST00000103822 86 ntBASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Gm43433-201ENSMUST00000196573 481 ntBASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.15□□□□□ -0.14
Zcchc9Q8R1J3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Gm12138-201ENSMUST00000122180 951 ntBASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Gm9229-201ENSMUST00000222777 126 ntBASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Zcchc9Q8R1J3 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Zcchc9Q8R1J3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Zcchc9Q8R1J3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Zcchc9Q8R1J3 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms