Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Atf7Q8R0S1 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Atf7Q8R0S1 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Atf7Q8R0S1 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atf7Q8R0S1 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atf7Q8R0S1 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.73■□□□□ 0.27
Atf7Q8R0S1 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atf7Q8R0S1 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atf7Q8R0S1 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.73■□□□□ 0.27
Atf7Q8R0S1 Gm15693-201ENSMUST00000120470 637 ntBASIC16.73■□□□□ 0.27
Atf7Q8R0S1 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.73■□□□□ 0.27
Atf7Q8R0S1 AA543401-201ENSMUST00000164248 1269 ntBASIC16.73■□□□□ 0.27
Atf7Q8R0S1 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Atf7Q8R0S1 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.73■□□□□ 0.27
Atf7Q8R0S1 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.73■□□□□ 0.27
Atf7Q8R0S1 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atf7Q8R0S1 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atf7Q8R0S1 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atf7Q8R0S1 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atf7Q8R0S1 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atf7Q8R0S1 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atf7Q8R0S1 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Atf7Q8R0S1 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atf7Q8R0S1 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Atf7Q8R0S1 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atf7Q8R0S1 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Atf7Q8R0S1 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atf7Q8R0S1 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Atf7Q8R0S1 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.72■□□□□ 0.27
Atf7Q8R0S1 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atf7Q8R0S1 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Atf7Q8R0S1 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Atf7Q8R0S1 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atf7Q8R0S1 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Atf7Q8R0S1 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Atf7Q8R0S1 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Atf7Q8R0S1 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Atf7Q8R0S1 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.72■□□□□ 0.27
Atf7Q8R0S1 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.72■□□□□ 0.27
Atf7Q8R0S1 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.72■□□□□ 0.27
Atf7Q8R0S1 Dupd1-202ENSMUST00000224735 548 ntBASIC16.72■□□□□ 0.27
Atf7Q8R0S1 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.72■□□□□ 0.27
Atf7Q8R0S1 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atf7Q8R0S1 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Atf7Q8R0S1 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atf7Q8R0S1 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atf7Q8R0S1 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Atf7Q8R0S1 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atf7Q8R0S1 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atf7Q8R0S1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atf7Q8R0S1 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atf7Q8R0S1 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atf7Q8R0S1 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Atf7Q8R0S1 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Atf7Q8R0S1 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atf7Q8R0S1 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atf7Q8R0S1 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Atf7Q8R0S1 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Atf7Q8R0S1 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16.71■□□□□ 0.27
Atf7Q8R0S1 Gm6415-201ENSMUST00000118488 348 ntBASIC16.71■□□□□ 0.27
Atf7Q8R0S1 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.71■□□□□ 0.27
Atf7Q8R0S1 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Atf7Q8R0S1 Gm26308-201ENSMUST00000157768 69 ntBASIC16.71■□□□□ 0.27
Atf7Q8R0S1 Gm28630-201ENSMUST00000187806 498 ntBASIC16.71■□□□□ 0.27
Atf7Q8R0S1 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.71■□□□□ 0.27
Atf7Q8R0S1 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atf7Q8R0S1 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atf7Q8R0S1 Gm16476-201ENSMUST00000221544 139 ntBASIC16.71■□□□□ 0.27
Atf7Q8R0S1 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atf7Q8R0S1 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atf7Q8R0S1 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Atf7Q8R0S1 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Atf7Q8R0S1 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atf7Q8R0S1 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Atf7Q8R0S1 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Atf7Q8R0S1 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Atf7Q8R0S1 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Atf7Q8R0S1 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Atf7Q8R0S1 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf7Q8R0S1 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.7■□□□□ 0.26
Atf7Q8R0S1 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf7Q8R0S1 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf7Q8R0S1 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Atf7Q8R0S1 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf7Q8R0S1 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.7■□□□□ 0.26
Atf7Q8R0S1 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.7■□□□□ 0.26
Atf7Q8R0S1 Gm12428-201ENSMUST00000119844 727 ntBASIC16.7■□□□□ 0.26
Atf7Q8R0S1 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.7■□□□□ 0.26
Atf7Q8R0S1 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf7Q8R0S1 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf7Q8R0S1 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf7Q8R0S1 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Atf7Q8R0S1 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf7Q8R0S1 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Atf7Q8R0S1 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.7■□□□□ 0.26
Atf7Q8R0S1 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf7Q8R0S1 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.7■□□□□ 0.26
Atf7Q8R0S1 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf7Q8R0S1 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf7Q8R0S1 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms