Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.39□□□□□ -0.27
Clrn1Q8K445 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.38□□□□□ -0.27
Clrn1Q8K445 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.38□□□□□ -0.27
Clrn1Q8K445 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Gm18766-201ENSMUST00000189811 808 ntBASIC13.38□□□□□ -0.27
Clrn1Q8K445 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.38□□□□□ -0.27
Clrn1Q8K445 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.38□□□□□ -0.27
Clrn1Q8K445 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Gm5867-201ENSMUST00000063197 592 ntBASIC13.38□□□□□ -0.27
Clrn1Q8K445 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.38□□□□□ -0.27
Clrn1Q8K445 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn1Q8K445 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.38□□□□□ -0.27
Clrn1Q8K445 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn1Q8K445 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Clrn1Q8K445 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn1Q8K445 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Clrn1Q8K445 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn1Q8K445 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn1Q8K445 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.37□□□□□ -0.27
Clrn1Q8K445 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn1Q8K445 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn1Q8K445 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn1Q8K445 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn1Q8K445 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn1Q8K445 Gm8410-201ENSMUST00000117225 605 ntBASIC13.37□□□□□ -0.27
Clrn1Q8K445 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.37□□□□□ -0.27
Clrn1Q8K445 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.37□□□□□ -0.27
Clrn1Q8K445 Gm29541-201ENSMUST00000191351 678 ntBASIC13.37□□□□□ -0.27
Clrn1Q8K445 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn1Q8K445 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.37□□□□□ -0.27
Clrn1Q8K445 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn1Q8K445 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.37□□□□□ -0.27
Clrn1Q8K445 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn1Q8K445 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn1Q8K445 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.37□□□□□ -0.27
Clrn1Q8K445 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn1Q8K445 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn1Q8K445 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn1Q8K445 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn1Q8K445 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn1Q8K445 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Clrn1Q8K445 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn1Q8K445 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.37□□□□□ -0.27
Clrn1Q8K445 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn1Q8K445 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Clrn1Q8K445 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 108.1 ms