Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CopaQ8CIE6 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.5□□□□□ -0.09
CopaQ8CIE6 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CopaQ8CIE6 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CopaQ8CIE6 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CopaQ8CIE6 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CopaQ8CIE6 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CopaQ8CIE6 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CopaQ8CIE6 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CopaQ8CIE6 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CopaQ8CIE6 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CopaQ8CIE6 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CopaQ8CIE6 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CopaQ8CIE6 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CopaQ8CIE6 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CopaQ8CIE6 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.49□□□□□ -0.09
CopaQ8CIE6 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CopaQ8CIE6 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CopaQ8CIE6 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CopaQ8CIE6 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CopaQ8CIE6 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CopaQ8CIE6 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CopaQ8CIE6 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CopaQ8CIE6 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CopaQ8CIE6 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CopaQ8CIE6 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.49□□□□□ -0.09
CopaQ8CIE6 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CopaQ8CIE6 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CopaQ8CIE6 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CopaQ8CIE6 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CopaQ8CIE6 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CopaQ8CIE6 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.48□□□□□ -0.09
CopaQ8CIE6 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CopaQ8CIE6 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.48□□□□□ -0.09
CopaQ8CIE6 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.48□□□□□ -0.09
CopaQ8CIE6 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CopaQ8CIE6 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CopaQ8CIE6 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.47□□□□□ -0.09
CopaQ8CIE6 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CopaQ8CIE6 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.47□□□□□ -0.09
CopaQ8CIE6 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Gm27306-201ENSMUST00000183970 107 ntBASIC14.47□□□□□ -0.09
CopaQ8CIE6 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.47□□□□□ -0.09
CopaQ8CIE6 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CopaQ8CIE6 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms