Protein–RNA interactions for Protein: Q8CEE7

Rdh13, Retinol dehydrogenase 13, mousemouse

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh13Q8CEE7 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rdh13Q8CEE7 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rdh13Q8CEE7 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Rdh13Q8CEE7 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Gm8584-201ENSMUST00000171982 758 ntBASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rdh13Q8CEE7 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Gm1401-201ENSMUST00000122048 772 ntBASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Gm10275-202ENSMUST00000168697 495 ntBASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Rpph1-201ENSMUST00000175096 319 ntBASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Gm5364-201ENSMUST00000216789 889 ntBASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Gm10275-201ENSMUST00000092620 635 ntBASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rdh13Q8CEE7 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Rdh13Q8CEE7 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rdh13Q8CEE7 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rdh13Q8CEE7 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rdh13Q8CEE7 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.77□□□□□ -0.21
Rdh13Q8CEE7 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.77□□□□□ -0.21
Rdh13Q8CEE7 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.77□□□□□ -0.21
Rdh13Q8CEE7 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rdh13Q8CEE7 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.77□□□□□ -0.21
Rdh13Q8CEE7 Gm9727-201ENSMUST00000161387 555 ntBASIC13.77□□□□□ -0.21
Rdh13Q8CEE7 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rdh13Q8CEE7 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rdh13Q8CEE7 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rdh13Q8CEE7 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rdh13Q8CEE7 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.77□□□□□ -0.21
Rdh13Q8CEE7 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms