Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.38
Lysmd4Q8CC84 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Lysmd4Q8CC84 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lysmd4Q8CC84 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Lysmd4Q8CC84 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.71□□□□□ -0.38
Lysmd4Q8CC84 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lysmd4Q8CC84 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Gm13036-201ENSMUST00000117799 748 ntBASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Gm28659-201ENSMUST00000188013 759 ntBASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Lysmd4Q8CC84 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd4Q8CC84 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Gm11452-201ENSMUST00000122376 690 ntBASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Gm18195-201ENSMUST00000207604 706 ntBASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms